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  5. Sam_g37196

Sam_g37196


Description : subfamily ABCG transporter & original description: none


Gene families : OG0000071 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000071_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sam_g37196
Cluster HCCA: Cluster_72

Target Alias Description ECC score Gene Family Method Actions
Als_g38727 PDR6, ATPDR6 subfamily ABCG transporter & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene01667.t1 ABCG40, PDR12,... subfamily ABCG transporter & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01035785001 ABCG40, PDR12,... Solute transport.primary active transport.ABC... 0.03 OrthoFinder output from all 47 species
GSVIVT01035786001 ABCG40, PDR12,... Solute transport.primary active transport.ABC... 0.04 OrthoFinder output from all 47 species
Mp2g14210.1 PEN3, ABCG36,... subfamily ABCG transporter 0.02 OrthoFinder output from all 47 species
Mp4g06670.1 PEN3, ABCG36,... subfamily ABCG transporter 0.02 OrthoFinder output from all 47 species
Ore_g04816 ABCG40, PDR12,... subfamily ABCG transporter & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g16126 PDR6, ATPDR6 subfamily ABCG transporter & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g08076 PEN3, ABCG36,... subfamily ABCG transporter & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g11094 PEN3, ABCG36,... subfamily ABCG transporter & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g37860 No alias subfamily ABCG transporter & original description: none 0.03 OrthoFinder output from all 47 species
Smo424639 PDR11, ATPDR11 Solute transport.primary active transport.ABC... 0.02 OrthoFinder output from all 47 species
Spa_g39900 ATPDR7, PDR7 subfamily ABCG transporter & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e003743_P001 PDR11, ATPDR11,... subfamily ABCG transporter 0.02 OrthoFinder output from all 47 species
Zm00001e026148_P001 PDR6, ATPDR6,... subfamily ABCG transporter 0.02 OrthoFinder output from all 47 species
Zm00001e037233_P001 PEN3, ABCG36,... subfamily ABCG transporter 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0140359 ABC-type transporter activity IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0005509 calcium ion binding IEP HCCA
InterPro domains Description Start Stop
IPR029481 ABC_trans_N 140 191
IPR013525 ABC_2_trans 552 764
IPR013525 ABC_2_trans 1231 1443
IPR013581 PDR_assoc 769 835
IPR003439 ABC_transporter-like_ATP-bd 933 1085
IPR003439 ABC_transporter-like_ATP-bd 216 398
IPR043926 ABCG_dom 431 485
No external refs found!