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  5. Sam_g37088

Sam_g37088


Description : not classified & original description: none


Gene families : OG0000957 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000957_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sam_g37088

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00001p00272380 evm_27.TU.AmTr_v1... Protein degradation.peptide tagging.Ubiquitin... 0.01 OrthoFinder output from all 47 species
Adi_g082958 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g112268 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g63256 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Azfi_s0212.g058186 No alias not classified & original description: CDS=102-653 0.04 OrthoFinder output from all 47 species
LOC_Os02g55480.1 LOC_Os02g55480 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
MA_10274793g0010 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Msp_g08268 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Solyc01g107290.3.1 Solyc01g107290 Probable E3 ubiquitin-protein ligase RHY1A... 0.02 OrthoFinder output from all 47 species
Solyc03g115465.1.1 Solyc03g115465 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Zm00001e009715_P001 Zm00001e009715 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000160 phosphorelay signal transduction system IEP HCCA
MF GO:0003682 chromatin binding IEP HCCA
MF GO:0004601 peroxidase activity IEP HCCA
BP GO:0006979 response to oxidative stress IEP HCCA
MF GO:0016209 antioxidant activity IEP HCCA
MF GO:0016684 oxidoreductase activity, acting on peroxide as acceptor IEP HCCA
BP GO:0035556 intracellular signal transduction IEP HCCA
MF GO:0046983 protein dimerization activity IEP HCCA
InterPro domains Description Start Stop
IPR001841 Znf_RING 219 263
No external refs found!