Sam_g36932

Description : E3 ubiquitin ligase & original description: none

Gene families : OG0001516 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001516_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Sam_g36932
Cluster	HCCA: Cluster_117

Target	Alias	Description	ECC score	Gene Family Method
GSVIVT01029539001	No alias	No description available	0.02	OrthoFinder output from all 47 species
Len_g05186	No alias	E3 ubiquitin ligase & original description: none	0.02	OrthoFinder output from all 47 species
Pir_g00449	No alias	E3 ubiquitin ligase & original description: none	0.03	OrthoFinder output from all 47 species
Sacu_v1.1_s0034.g011164	No alias	E3 ubiquitin ligase & original description: CDS=49-897	0.03	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0008270	zinc ion binding	IEA	Interproscan
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043169	cation binding	None	Extended
MF	GO:0046872	metal ion binding	None	Extended
MF	GO:0046914	transition metal ion binding	None	Extended

Type	GO Term	Name	Evidence	Source
MF	GO:0010181	FMN binding	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR011016	Znf_RING-CH	56	103

External Links

No external refs found!