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  5. Sam_g36881

Sam_g36881


Description : autophagosome ubiquitin-fold protein *(ATG8) & original description: none


Gene families : OG0000801 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000801_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sam_g36881
Cluster HCCA: Cluster_3

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00044p00225880 ATG8F,... Vesicle trafficking.autophagosome formation.ATG8/ATG12... 0.02 OrthoFinder output from all 47 species
AT2G45170 ATG8E, ATATG8E AUTOPHAGY 8E 0.04 OrthoFinder output from all 47 species
AT4G21980 ATG8A, APG8A Ubiquitin-like superfamily protein 0.02 OrthoFinder output from all 47 species
Ala_g00497 ATG8F autophagosome ubiquitin-fold protein *(ATG8) & original... 0.02 OrthoFinder output from all 47 species
Als_g31042 ATG8F autophagosome ubiquitin-fold protein *(ATG8) & original... 0.02 OrthoFinder output from all 47 species
Als_g53303 ATG8F autophagosome ubiquitin-fold protein *(ATG8) & original... 0.02 OrthoFinder output from all 47 species
Aop_g00128 ATG8F autophagosome ubiquitin-fold protein *(ATG8) & original... 0.03 OrthoFinder output from all 47 species
Ceric.21G035500.1 ATG8D, Ceric.21G035500 autophagosome ubiquitin-fold protein *(ATG8) & original... 0.03 OrthoFinder output from all 47 species
Ceric.27G065300.1 ATG8F, Ceric.27G065300 autophagosome ubiquitin-fold protein *(ATG8) & original... 0.02 OrthoFinder output from all 47 species
Dac_g11854 ATG8F autophagosome ubiquitin-fold protein *(ATG8) & original... 0.03 OrthoFinder output from all 47 species
Gb_21524 ATG8F ATG8 autophagosome ubiquitin-fold protein 0.02 OrthoFinder output from all 47 species
LOC_Os07g32800.2 ATG8C, LOC_Os07g32800 ATG8 autophagosome ubiquitin-fold protein 0.03 OrthoFinder output from all 47 species
Lfl_g28481 ATG8F autophagosome ubiquitin-fold protein *(ATG8) & original... 0.02 OrthoFinder output from all 47 species
Nbi_g27314 ATG8F autophagosome ubiquitin-fold protein *(ATG8) & original... 0.02 OrthoFinder output from all 47 species
Ppi_g09542 ATG8E, ATATG8E autophagosome ubiquitin-fold protein *(ATG8) & original... 0.02 OrthoFinder output from all 47 species
Sam_g18568 No alias autophagosome ubiquitin-fold protein *(ATG8) & original... 0.03 OrthoFinder output from all 47 species
Solyc08g078820.3.1 ATG8F, Solyc08g078820 ATG8 autophagosome ubiquitin-fold protein 0.04 OrthoFinder output from all 47 species
Zm00001e041680_P001 ATG8C, Zm00001e041680 ATG8 autophagosome ubiquitin-fold protein 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0008289 lipid binding IEP HCCA
MF GO:0016887 ATP hydrolysis activity IEP HCCA
InterPro domains Description Start Stop
IPR004241 Atg8-like 63 166
No external refs found!