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  5. Sam_g36856

Sam_g36856


Description : transcriptional co-regulator *(OFP) & original description: none


Gene families : OG0000209 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000209_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sam_g36856
Cluster HCCA: Cluster_3

Target Alias Description ECC score Gene Family Method Actions
AT2G30400 OFP2, ATOFP2 ovate family protein 2 0.03 OrthoFinder output from all 47 species
Aspi01Gene32425.t1 Aspi01Gene32425 transcriptional co-regulator *(OFP) & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene58205.t1 OFP8, ATOFP8,... transcriptional co-regulator *(OFP) & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g12032 ATOFP5, OFP5 transcriptional co-regulator *(OFP) & original description: none 0.02 OrthoFinder output from all 47 species
LOC_Os04g33870.1 ATOFP13, OFP13,... transcription factor (OFP) 0.01 OrthoFinder output from all 47 species
LOC_Os04g58820.1 ATOFP13, OFP13,... transcription factor (OFP) 0.02 OrthoFinder output from all 47 species
LOC_Os10g38880.1 OFP8, ATOFP8,... transcription factor (OFP) 0.02 OrthoFinder output from all 47 species
Nbi_g08652 ATOFP5, OFP5 transcriptional co-regulator *(OFP) & original description: none 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0014.g006202 No alias transcriptional co-regulator *(OFP) & original... 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s3638.g028907 No alias transcriptional co-regulator *(OFP) & original... 0.02 OrthoFinder output from all 47 species
Solyc09g018200.1.1 ATOFP1, OFP1,... transcription factor (OFP) 0.02 OrthoFinder output from all 47 species
Tin_g25338 ATOFP6, OFP6 transcriptional co-regulator *(OFP) & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g31037 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Zm00001e019432_P001 OFP4, ATOFP4,... transcription factor (OFP) 0.02 OrthoFinder output from all 47 species
Zm00001e031752_P001 Zm00001e031752 transcription factor (OFP) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004611 phosphoenolpyruvate carboxykinase activity IEP HCCA
MF GO:0004612 phosphoenolpyruvate carboxykinase (ATP) activity IEP HCCA
MF GO:0005215 transporter activity IEP HCCA
BP GO:0005996 monosaccharide metabolic process IEP HCCA
BP GO:0006006 glucose metabolic process IEP HCCA
BP GO:0006094 gluconeogenesis IEP HCCA
MF GO:0015095 magnesium ion transmembrane transporter activity IEP HCCA
BP GO:0015693 magnesium ion transport IEP HCCA
BP GO:0016051 carbohydrate biosynthetic process IEP HCCA
MF GO:0016830 carbon-carbon lyase activity IEP HCCA
MF GO:0016831 carboxy-lyase activity IEP HCCA
BP GO:0019318 hexose metabolic process IEP HCCA
BP GO:0019319 hexose biosynthetic process IEP HCCA
MF GO:0022857 transmembrane transporter activity IEP HCCA
BP GO:0030001 metal ion transport IEP HCCA
BP GO:0046364 monosaccharide biosynthetic process IEP HCCA
MF GO:0046873 metal ion transmembrane transporter activity IEP HCCA
InterPro domains Description Start Stop
IPR006458 Ovate_C 264 315
No external refs found!