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  5. Sam_g36827

Sam_g36827


Description : cohesin cofactor *(PDS5) & original description: none


Gene families : OG0000616 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000616_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sam_g36827

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00061p00213120 evm_27.TU.AmTr_v1... Cell cycle.mitosis and meiosis.sister chromatid... 0.02 OrthoFinder output from all 47 species
AMTR_s00065p00174980 evm_27.TU.AmTr_v1... Cell cycle.mitosis and meiosis.sister chromatid... 0.02 OrthoFinder output from all 47 species
Cba_g18100 No alias cohesin cofactor *(PDS5) & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.11G037000.1 Ceric.11G037000 cohesin cofactor *(PDS5) & original description:... 0.04 OrthoFinder output from all 47 species
Dcu_g14818 No alias cohesin cofactor *(PDS5) & original description: none 0.05 OrthoFinder output from all 47 species
Ehy_g25801 No alias cohesin cofactor *(PDS5) & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01035890001 No alias Cell cycle.mitosis and meiosis.sister chromatid... 0.03 OrthoFinder output from all 47 species
Gb_09525 No alias cohesin cofactor (PDS5) 0.04 OrthoFinder output from all 47 species
Gb_23673 No alias cohesin cofactor (PDS5) 0.03 OrthoFinder output from all 47 species
Lfl_g09667 No alias cohesin cofactor *(PDS5) & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g25803 No alias cohesin cofactor *(PDS5) & original description: none 0.02 OrthoFinder output from all 47 species
Nbi_g28747 No alias cohesin cofactor *(PDS5) & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g04827 No alias cohesin cofactor *(PDS5) & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g18717 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g44286 No alias cohesin cofactor *(PDS5) & original description: none 0.02 OrthoFinder output from all 47 species
Solyc11g012770.2.1 Solyc11g012770 cohesin cofactor (PDS5) 0.02 OrthoFinder output from all 47 species
Zm00001e022962_P003 Zm00001e022962 cohesin cofactor (PDS5) 0.02 OrthoFinder output from all 47 species
Zm00001e030989_P001 Zm00001e030989 cohesin cofactor (PDS5) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003682 chromatin binding IEP HCCA

No InterPro domains available for this sequence

No external refs found!