Sam_g36705

Description : component *(ArpC5) of Arp2/3 actin polymerization initiation complex & original description: none

Gene families : OG0008040 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0008040_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Sam_g36705

Target	Alias	Description	ECC score	Gene Family Method
Dde_g01099	CRK, ARPC5	component *(ArpC5) of Arp2/3 actin polymerization...	0.03	OrthoFinder output from all 47 species
Ehy_g07246	CRK, ARPC5	component *(ArpC5) of Arp2/3 actin polymerization...	0.02	OrthoFinder output from all 47 species
Ore_g10171	CRK, ARPC5	component *(ArpC5) of Arp2/3 actin polymerization...	0.02	OrthoFinder output from all 47 species
Ppi_g17461	CRK, ARPC5	component *(ArpC5) of Arp2/3 actin polymerization...	0.03	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005856	cytoskeleton	None	Extended
CC	GO:0005885	Arp2/3 protein complex	IEA	Interproscan
BP	GO:0007015	actin filament organization	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009987	cellular process	None	Extended
CC	GO:0015629	actin cytoskeleton	IEA	Interproscan
BP	GO:0016043	cellular component organization	None	Extended
CC	GO:0032991	protein-containing complex	None	Extended
BP	GO:0034314	Arp2/3 complex-mediated actin nucleation	IEA	Interproscan
CC	GO:0043226	organelle	None	Extended
CC	GO:0043228	non-membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043232	intracellular non-membrane-bounded organelle	None	Extended
BP	GO:0045010	actin nucleation	None	Extended
BP	GO:0071840	cellular component organization or biogenesis	None	Extended
BP	GO:0097435	supramolecular fiber organization	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended

Type	GO Term	Name	Evidence	Source
CC	GO:0005667	transcription regulator complex	IEP	HCCA
CC	GO:0005672	transcription factor TFIIA complex	IEP	HCCA
BP	GO:0006139	nucleobase-containing compound metabolic process	IEP	HCCA
BP	GO:0006352	DNA-templated transcription initiation	IEP	HCCA
BP	GO:0006367	transcription initiation at RNA polymerase II promoter	IEP	HCCA
BP	GO:0006725	cellular aromatic compound metabolic process	IEP	HCCA
BP	GO:0016070	RNA metabolic process	IEP	HCCA
BP	GO:0032774	RNA biosynthetic process	IEP	HCCA
MF	GO:0035299	inositol pentakisphosphate 2-kinase activity	IEP	HCCA
BP	GO:0046483	heterocycle metabolic process	IEP	HCCA
BP	GO:0090304	nucleic acid metabolic process	IEP	HCCA
CC	GO:0090575	RNA polymerase II transcription regulator complex	IEP	HCCA
CC	GO:0140513	nuclear protein-containing complex	IEP	HCCA
BP	GO:1901360	organic cyclic compound metabolic process	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR006789	ARPC5	46	174

External Links

No external refs found!