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  5. Sam_g36499

Sam_g36499


Description : not classified & original description: none


Gene families : OG0000207 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000207_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sam_g36499

Target Alias Description ECC score Gene Family Method Actions
AT1G47900 No alias Plant protein of unknown function (DUF869) 0.02 OrthoFinder output from all 47 species
Adi_g002763 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g08039 No alias microtubule assembly factor *(TCS1) & original description: none 0.02 OrthoFinder output from all 47 species
Als_g14016 No alias microtubule assembly factor *(TCS1) & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene01374.t1 Aspi01Gene01374 microtubule assembly factor *(TCS1) & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene62959.t1 Aspi01Gene62959 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g04087 No alias microtubule assembly factor *(TCS1) & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g04089 No alias microtubule assembly factor *(TCS1) & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.31G017100.1 Ceric.31G017100 microtubule assembly factor *(TCS1) & original... 0.02 OrthoFinder output from all 47 species
LOC_Os04g55570.1 LOC_Os04g55570 Filament-like plant protein 4 OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species
Ppi_g30136 No alias microtubule assembly factor *(TCS1) & original description: none 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0057.g014695 No alias not classified & original description: CDS=889-4410 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0104.g020062 No alias not classified & original description: CDS=1-3423 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0126.g021772 No alias microtubule assembly factor *(TCS1) & original... 0.02 OrthoFinder output from all 47 species
Sam_g16217 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g06414 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Zm00001e041784_P001 Zm00001e041784 Filament-like plant protein 6 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEP HCCA
BP GO:0006952 defense response IEP HCCA
MF GO:0008289 lipid binding IEP HCCA
BP GO:0017006 protein-tetrapyrrole linkage IEP HCCA
BP GO:0017007 protein-bilin linkage IEP HCCA
BP GO:0017009 protein-phycocyanobilin linkage IEP HCCA
InterPro domains Description Start Stop
IPR008587 FPP_plant 688 889
IPR008587 FPP_plant 114 395
No external refs found!