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  5. Sam_g36474

Sam_g36474


Description : not classified & original description: none


Gene families : OG0005481 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0005481_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sam_g36474
Cluster HCCA: Cluster_115

Target Alias Description ECC score Gene Family Method Actions
Adi_g043102 CP31B not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g08472 ATRBP31, CP31,... not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g21995 CP29 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g54745 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g07791 CP31B not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g12215 CP31B not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g68436 ATRBP31, CP31,... not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.14G059900.1 CP31B, Ceric.14G059900 not classified & original description: pacid=50634866... 0.02 OrthoFinder output from all 47 species
Dde_g12508 ATRBP31, CP31,... not classified & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g05319 ATRBP31, CP31,... not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g08575 ATRBP31, CP31,... not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g26689 ATRBP31, CP31,... not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g53809 ATRBP31, CP31,... not classified & original description: none 0.01 OrthoFinder output from all 47 species
Ppi_g16378 ATRBP31, CP31,... not classified & original description: none 0.07 OrthoFinder output from all 47 species
Ppi_g63347 ATRBP31, CP31,... not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0018.g007443 ATRBP31, CP31,... not classified & original description: CDS=1-957 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000049 tRNA binding IEP HCCA
MF GO:0000287 magnesium ion binding IEP HCCA
MF GO:0004177 aminopeptidase activity IEP HCCA
MF GO:0004743 pyruvate kinase activity IEP HCCA
MF GO:0005515 protein binding IEP HCCA
CC GO:0005737 cytoplasm IEP HCCA
BP GO:0006090 pyruvate metabolic process IEP HCCA
BP GO:0006096 glycolytic process IEP HCCA
BP GO:0006165 nucleoside diphosphate phosphorylation IEP HCCA
BP GO:0006457 protein folding IEP HCCA
BP GO:0006757 ATP generation from ADP IEP HCCA
BP GO:0008037 cell recognition IEP HCCA
MF GO:0008235 metalloexopeptidase activity IEP HCCA
MF GO:0008238 exopeptidase activity IEP HCCA
BP GO:0009132 nucleoside diphosphate metabolic process IEP HCCA
BP GO:0009135 purine nucleoside diphosphate metabolic process IEP HCCA
BP GO:0009179 purine ribonucleoside diphosphate metabolic process IEP HCCA
BP GO:0009185 ribonucleoside diphosphate metabolic process IEP HCCA
BP GO:0009987 cellular process IEP HCCA
BP GO:0010564 regulation of cell cycle process IEP HCCA
BP GO:0016052 carbohydrate catabolic process IEP HCCA
MF GO:0030955 potassium ion binding IEP HCCA
MF GO:0031072 heat shock protein binding IEP HCCA
MF GO:0031420 alkali metal ion binding IEP HCCA
BP GO:0032787 monocarboxylic acid metabolic process IEP HCCA
BP GO:0032954 regulation of cytokinetic process IEP HCCA
BP GO:0032955 regulation of division septum assembly IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0043169 cation binding IEP HCCA
BP GO:0044087 regulation of cellular component biogenesis IEP HCCA
BP GO:0046031 ADP metabolic process IEP HCCA
MF GO:0046872 metal ion binding IEP HCCA
BP GO:0046939 nucleotide phosphorylation IEP HCCA
BP GO:0048544 recognition of pollen IEP HCCA
MF GO:0051082 unfolded protein binding IEP HCCA
BP GO:0051128 regulation of cellular component organization IEP HCCA
BP GO:0051301 cell division IEP HCCA
MF GO:0051536 iron-sulfur cluster binding IEP HCCA
MF GO:0051540 metal cluster binding IEP HCCA
BP GO:0051726 regulation of cell cycle IEP HCCA
MF GO:0070006 metalloaminopeptidase activity IEP HCCA
BP GO:1901891 regulation of cell septum assembly IEP HCCA
InterPro domains Description Start Stop
IPR000504 RRM_dom 161 229
IPR000504 RRM_dom 304 373
No external refs found!