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  5. Lfl_g28999

Lfl_g28999 (ATMAMI, MAMI)


Aliases : ATMAMI, MAMI

Description : contact site modulator (VST) of ER-cytoskeleton-plasmamembrane interface & original description: none


Gene families : OG0000767 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000767_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Lfl_g28999
Cluster HCCA: Cluster_120

Target Alias Description ECC score Gene Family Method Actions
Ala_g08812 ATMAMI, MAMI contact site modulator (VST) of... 0.03 OrthoFinder output from all 47 species
Dcu_g06213 ATMAMI, MAMI contact site modulator (VST) of... 0.03 OrthoFinder output from all 47 species
LOC_Os08g04620.1 ATMAMI, MAMI,... Vesicle-associated protein 4-2 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Msp_g03887 ATMAMI, MAMI contact site modulator (VST) of... 0.03 OrthoFinder output from all 47 species
Msp_g37340 ATMAMI, MAMI contact site modulator (VST) of... 0.03 OrthoFinder output from all 47 species
Solyc02g079230.3.1 ATMAMI, MAMI,... Vesicle-associated protein 4-2 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Spa_g15443 ATMAMI, MAMI contact site modulator (VST) of... 0.03 OrthoFinder output from all 47 species
Spa_g25434 ATMAMI, MAMI contact site modulator (VST) of... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003725 double-stranded RNA binding IEP HCCA
MF GO:0005488 binding IEP HCCA
CC GO:0005615 extracellular space IEP HCCA
MF GO:0008270 zinc ion binding IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0043169 cation binding IEP HCCA
MF GO:0046872 metal ion binding IEP HCCA
MF GO:0051287 NAD binding IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
InterPro domains Description Start Stop
IPR000535 MSP_dom 56 160
No external refs found!