1. Home
  2. Species
  3. Salvinia molesta
  4. Sequence
  5. Sam_g36281

Sam_g36281


Description : transcription factor *(DOF) & original description: none


Gene families : OG0000067 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000067_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sam_g36281

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00160p00038440 HCA2, DOF5.6,... RNA biosynthesis.transcriptional activation.C2C2... 0.03 OrthoFinder output from all 47 species
AT5G60850 OBP4 OBF binding protein 4 0.02 OrthoFinder output from all 47 species
AT5G62430 CDF1 cycling DOF factor 1 0.03 OrthoFinder output from all 47 species
Als_g01888 CDF3 transcription factor *(DOF) & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g18797 OBP3 transcription factor *(DOF) & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene15304.t1 OBP4, Aspi01Gene15304 transcription factor *(DOF) & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.22G023400.1 OBP3, Ceric.22G023400 transcription factor *(DOF) & original description:... 0.03 OrthoFinder output from all 47 species
Cre12.g521150 CDF2 RNA biosynthesis.transcriptional activation.C2C2... 0.02 OrthoFinder output from all 47 species
Dac_g21081 OBP3 transcription factor *(DOF) & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g12302 CDF3 transcription factor *(DOF) & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g26839 CDF1 transcription factor *(DOF) & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01007992001 CDF1 RNA biosynthesis.transcriptional activation.C2C2... 0.03 OrthoFinder output from all 47 species
LOC_Os03g07360.1 CDF3, LOC_Os03g07360 transcription factor (DOF) 0.03 OrthoFinder output from all 47 species
Ppi_g29376 ADOF1, DOF1 transcription factor *(DOF) & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g61765 DAG1 transcription factor *(DOF) & original description: none 0.03 OrthoFinder output from all 47 species
Solyc04g079570.1.1 OBP1, Solyc04g079570 transcription factor (DOF) 0.02 OrthoFinder output from all 47 species
Zm00001e000526_P001 CDF3, Zm00001e000526 transcription factor (DOF) 0.05 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA Interproscan
BP GO:0006355 regulation of DNA-templated transcription IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
BP GO:0007165 signal transduction IEP HCCA
CC GO:0009521 photosystem IEP HCCA
CC GO:0009523 photosystem II IEP HCCA
CC GO:0009654 photosystem II oxygen evolving complex IEP HCCA
MF GO:0015035 protein-disulfide reductase activity IEP HCCA
MF GO:0015036 disulfide oxidoreductase activity IEP HCCA
BP GO:0015979 photosynthesis IEP HCCA
MF GO:0016667 oxidoreductase activity, acting on a sulfur group of donors IEP HCCA
CC GO:0019898 extrinsic component of membrane IEP HCCA
CC GO:1990204 oxidoreductase complex IEP HCCA
InterPro domains Description Start Stop
IPR003851 Znf_Dof 164 218
No external refs found!