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  5. Sam_g36227

Sam_g36227


Description : not classified & original description: none


Gene families : OG0000136 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000136_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sam_g36227
Cluster HCCA: Cluster_176

Target Alias Description ECC score Gene Family Method Actions
Adi_g032700 GAUT11 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g15798 LGT4, GAUT10 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g02192 GAUT13 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g37053 GAUT8, QUA1 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.03G086500.1 GAUT13, Ceric.03G086500 not classified & original description: pacid=50571381... 0.02 OrthoFinder output from all 47 species
Dac_g02848 GAUT8, QUA1 glycosyltransferase (QUA1) involved in pectin-dependent... 0.02 OrthoFinder output from all 47 species
LOC_Os05g40720.1 GAUT7, LGT7,... component GAUT7 of GAUT1:GAUT7 galacturonosyltransferase complex 0.02 OrthoFinder output from all 47 species
Lfl_g18277 LGT1, GAUT1 component *(GAUT1) of GAUT1:GAUT7... 0.02 OrthoFinder output from all 47 species
Msp_g01659 GAUT13 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g04939 LGT1, GAUT1 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pnu_g11266 LGT1, GAUT1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g11909 GAUT11 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0278.g027082 LGT1, GAUT1 not classified & original description: CDS=704-3064 0.04 OrthoFinder output from all 47 species
Sam_g15907 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Solyc10g074650.2.1 GAUT7, LGT7,... component GAUT7 of GAUT1:GAUT7 galacturonosyltransferase complex 0.02 OrthoFinder output from all 47 species
Tin_g03355 GAUT11 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g13122 GAUT8, QUA1 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Zm00001e001553_P002 GAUT7, LGT7,... component GAUT7 of GAUT1:GAUT7 galacturonosyltransferase complex 0.02 OrthoFinder output from all 47 species
Zm00001e010031_P002 GAUT4, Zm00001e010031 Probable galacturonosyltransferase 4 OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species
Zm00001e039252_P002 GAUT7, LGT7,... component GAUT7 of GAUT1:GAUT7 galacturonosyltransferase complex 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0016757 glycosyltransferase activity IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0009055 electron transfer activity IEP HCCA
MF GO:0015267 channel activity IEP HCCA
MF GO:0022803 passive transmembrane transporter activity IEP HCCA
MF GO:0051536 iron-sulfur cluster binding IEP HCCA
MF GO:0051540 metal cluster binding IEP HCCA
InterPro domains Description Start Stop
IPR002495 Glyco_trans_8 158 493
No external refs found!