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  5. Sam_g36226

Sam_g36226


Description : AS2/LOB-type transcription factor & original description: none


Gene families : OG0000114 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000114_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sam_g36226
Cluster HCCA: Cluster_168

Target Alias Description ECC score Gene Family Method Actions
AT1G31320 LBD4 LOB domain-containing protein 4 0.03 OrthoFinder output from all 47 species
Dcu_g25272 LBD15, ASL11 AS2/LOB-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g25757 LBD4 AS2/LOB-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g26891 LOB AS2/LOB-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0188.g025166 LOB AS2/LOB-type transcription factor & original... 0.02 OrthoFinder output from all 47 species
Sam_g38611 No alias AS2/LOB-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Solyc02g069440.3.1 LBD4, Solyc02g069440 transcription factor (AS2/LOB) 0.02 OrthoFinder output from all 47 species
Solyc11g045530.3.1 LBD4, Solyc11g045530 transcription factor (AS2/LOB) 0.03 OrthoFinder output from all 47 species
Tin_g34227 LOB AS2/LOB-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEP HCCA
MF GO:0046983 protein dimerization activity IEP HCCA
InterPro domains Description Start Stop
IPR004883 LOB 78 175
No external refs found!