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  5. Sam_g36200

Sam_g36200


Description : threonylcarbamoyl-AMP synthase & original description: none


Gene families : OG0005724 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0005724_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sam_g36200

Target Alias Description ECC score Gene Family Method Actions
Ala_g22413 No alias threonylcarbamoyl-AMP synthase & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.25G052800.1 Ceric.25G052800 threonylcarbamoyl-AMP synthase & original description:... 0.02 OrthoFinder output from all 47 species
Pir_g01254 No alias threonylcarbamoyl-AMP synthase & original description: none 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003725 double-stranded RNA binding IEA Interproscan
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Type GO Term Name Evidence Source
CC GO:0000428 DNA-directed RNA polymerase complex IEP HCCA
BP GO:0001522 pseudouridine synthesis IEP HCCA
CC GO:0005666 RNA polymerase III complex IEP HCCA
BP GO:0006139 nucleobase-containing compound metabolic process IEP HCCA
BP GO:0006351 DNA-templated transcription IEP HCCA
BP GO:0006383 transcription by RNA polymerase III IEP HCCA
BP GO:0006725 cellular aromatic compound metabolic process IEP HCCA
BP GO:0009451 RNA modification IEP HCCA
MF GO:0009982 pseudouridine synthase activity IEP HCCA
BP GO:0016070 RNA metabolic process IEP HCCA
MF GO:0016614 oxidoreductase activity, acting on CH-OH group of donors IEP HCCA
MF GO:0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor IEP HCCA
MF GO:0016853 isomerase activity IEP HCCA
MF GO:0016866 intramolecular transferase activity IEP HCCA
CC GO:0030880 RNA polymerase complex IEP HCCA
BP GO:0032774 RNA biosynthetic process IEP HCCA
BP GO:0034641 cellular nitrogen compound metabolic process IEP HCCA
BP GO:0043412 macromolecule modification IEP HCCA
BP GO:0046483 heterocycle metabolic process IEP HCCA
MF GO:0051287 NAD binding IEP HCCA
CC GO:0055029 nuclear DNA-directed RNA polymerase complex IEP HCCA
CC GO:0061695 transferase complex, transferring phosphorus-containing groups IEP HCCA
BP GO:0090304 nucleic acid metabolic process IEP HCCA
BP GO:0097659 nucleic acid-templated transcription IEP HCCA
CC GO:0140513 nuclear protein-containing complex IEP HCCA
CC GO:0140535 intracellular protein-containing complex IEP HCCA
BP GO:1901360 organic cyclic compound metabolic process IEP HCCA
CC GO:1990234 transferase complex IEP HCCA
InterPro domains Description Start Stop
IPR006070 Sua5-like_dom 77 215
No external refs found!