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  5. Sam_g36188

Sam_g36188


Description : not classified & original description: none


Gene families : OG0000015 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sam_g36188

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00044p00189590 MYB84, RAX3,... RNA biosynthesis.transcriptional activation.MYB... 0.02 OrthoFinder output from all 47 species
AT1G66370 AtMYB113, MYB113 myb domain protein 113 0.03 OrthoFinder output from all 47 species
Ala_g37179 AtMYB107, MYB107 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g40583 ATMIXTA, MYB16, ATMYB16 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g62102 ATY53, ATMYB67, MYB67 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene67209.t1 ATMIXTA, MYB16,... not classified & original description: none 0.02 OrthoFinder output from all 47 species
Azfi_s0008.g011612 ATMYB61, MYB61 not classified & original description: CDS=52-1407 0.03 OrthoFinder output from all 47 species
Azfi_s0021.g015882 AtMYB97, MYB97 MYB class-R2R3 subgroup-18 transcription factor &... 0.03 OrthoFinder output from all 47 species
Cba_g22833 ATMIXTA, MYB16, ATMYB16 not classified & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01017716001 ATMYB61, MYB61 RNA biosynthesis.transcriptional activation.MYB... 0.03 OrthoFinder output from all 47 species
GSVIVT01036802001 MYB58, ATMYB58 RNA biosynthesis.transcriptional activation.MYB... 0.03 OrthoFinder output from all 47 species
Gb_13117 AtMYB93, MYB93 transcription factor (MYB) 0.02 OrthoFinder output from all 47 species
Gb_34464 ATMYB65, MYB65 Transcription factor GAMYB OS=Oryza sativa subsp.... 0.03 OrthoFinder output from all 47 species
Gb_36145 ATMIXTA, MYB16, ATMYB16 transcription factor (MYB) 0.04 OrthoFinder output from all 47 species
Len_g20319 AtMYB85, MYB85 MYB class-R2R3 transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
MA_139448g0010 AtMYB79, MYB79 transcription factor (MYB) 0.03 OrthoFinder output from all 47 species
MA_1850812g0010 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
MA_21440g0010 MYB3, ATMYB3 transcription factor (MYB) 0.03 OrthoFinder output from all 47 species
MA_24271g0020 AtMYB93, MYB93 transcription factor (MYB) 0.02 OrthoFinder output from all 47 species
MA_3665g0010 MYB86, ATMYB86 transcription factor (MYB) 0.02 OrthoFinder output from all 47 species
MA_460508g0010 ATMYB14, MYB14, MYB14AT transcription factor (MYB) 0.02 OrthoFinder output from all 47 species
MA_53373g0010 ATMYB5, MYB5 transcription factor (MYB) 0.03 OrthoFinder output from all 47 species
MA_95226g0010 AtMYB17, MYB17 transcription factor (MYB) 0.02 OrthoFinder output from all 47 species
Mp3g07510.1 MYB3, ATMYB3 transcription factor (MYB) 0.02 OrthoFinder output from all 47 species
Sam_g03372 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Smo84195 ATMYB61, MYB61 RNA biosynthesis.transcriptional activation.MYB... 0.03 OrthoFinder output from all 47 species
Solyc03g025870.3.1 MYB19, AtMYB19,... transcription factor (MYB) 0.02 OrthoFinder output from all 47 species
Solyc03g116100.3.1 MYBCOV1, MYB96,... transcription factor (MYB) 0.02 OrthoFinder output from all 47 species
Tin_g31077 AtMYB20, MYB20 MYB class-R2R3 transcription factor & original description: none 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP HCCA
MF GO:0004672 protein kinase activity IEP HCCA
MF GO:0005524 ATP binding IEP HCCA
BP GO:0006468 protein phosphorylation IEP HCCA
BP GO:0006793 phosphorus metabolic process IEP HCCA
BP GO:0006796 phosphate-containing compound metabolic process IEP HCCA
MF GO:0016301 kinase activity IEP HCCA
BP GO:0016310 phosphorylation IEP HCCA
MF GO:0016740 transferase activity IEP HCCA
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP HCCA
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
BP GO:0019538 protein metabolic process IEP HCCA
MF GO:0030554 adenyl nucleotide binding IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
MF GO:0032559 adenyl ribonucleotide binding IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
BP GO:0036211 protein modification process IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0043168 anion binding IEP HCCA
BP GO:0043412 macromolecule modification IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
MF GO:0140096 catalytic activity, acting on a protein IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
BP GO:1901564 organonitrogen compound metabolic process IEP HCCA
InterPro domains Description Start Stop
IPR001005 SANT/Myb 67 111
IPR001005 SANT/Myb 14 61
No external refs found!