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  5. Sam_g35675

Sam_g35675


Description : E2 ubiquitin-conjugating enzyme *(UBC32) & original description: none


Gene families : OG0003027 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003027_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sam_g35675

Target Alias Description ECC score Gene Family Method Actions
Aop_g09981 UBC34 E2 ubiquitin-conjugating enzyme *(UBC32) & original... 0.03 OrthoFinder output from all 47 species
Azfi_s0002.g001323 UBC33 E2 ubiquitin-conjugating enzyme *(UBC32) & original... 0.03 OrthoFinder output from all 47 species
LOC_Os06g09330.1 UBC34, LOC_Os06g09330 E2 ubiquitin-conjugating component Ubc33/34 of Doa10 E3... 0.02 OrthoFinder output from all 47 species
Lfl_g06914 UBC33 E2 ubiquitin-conjugating enzyme *(UBC32) & original... 0.03 OrthoFinder output from all 47 species
Mp8g10700.1 UBC33 E2 ubiquitin-conjugating component Ubc33/34 of Doa10 E3... 0.02 OrthoFinder output from all 47 species
Nbi_g33993 UBC33 E2 ubiquitin-conjugating enzyme *(UBC32) & original... 0.02 OrthoFinder output from all 47 species
Spa_g21189 UBC34 E2 ubiquitin-conjugating enzyme *(UBC32) & original... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
CC GO:0000151 ubiquitin ligase complex IEP HCCA
CC GO:0000152 nuclear ubiquitin ligase complex IEP HCCA
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003723 RNA binding IEP HCCA
MF GO:0005096 GTPase activator activity IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005515 protein binding IEP HCCA
CC GO:0005667 transcription regulator complex IEP HCCA
CC GO:0005680 anaphase-promoting complex IEP HCCA
BP GO:0005996 monosaccharide metabolic process IEP HCCA
MF GO:0008047 enzyme activator activity IEP HCCA
MF GO:0008081 phosphoric diester hydrolase activity IEP HCCA
BP GO:0009719 response to endogenous stimulus IEP HCCA
BP GO:0009725 response to hormone IEP HCCA
BP GO:0009733 response to auxin IEP HCCA
BP GO:0010033 response to organic substance IEP HCCA
MF GO:0016787 hydrolase activity IEP HCCA
BP GO:0019321 pentose metabolic process IEP HCCA
BP GO:0019566 arabinose metabolic process IEP HCCA
MF GO:0030234 enzyme regulator activity IEP HCCA
MF GO:0030695 GTPase regulator activity IEP HCCA
MF GO:0031072 heat shock protein binding IEP HCCA
CC GO:0031461 cullin-RING ubiquitin ligase complex IEP HCCA
CC GO:0032991 protein-containing complex IEP HCCA
BP GO:0042221 response to chemical IEP HCCA
MF GO:0042578 phosphoric ester hydrolase activity IEP HCCA
BP GO:0046373 L-arabinose metabolic process IEP HCCA
MF GO:0046556 alpha-L-arabinofuranosidase activity IEP HCCA
MF GO:0051082 unfolded protein binding IEP HCCA
MF GO:0060589 nucleoside-triphosphatase regulator activity IEP HCCA
CC GO:0140513 nuclear protein-containing complex IEP HCCA
CC GO:0140535 intracellular protein-containing complex IEP HCCA
MF GO:0140677 molecular function activator activity IEP HCCA
CC GO:1990234 transferase complex IEP HCCA
InterPro domains Description Start Stop
IPR000608 UBQ-conjugat_E2 68 181
No external refs found!