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  5. Sam_g35438

Sam_g35438


Description : P2B-type calcium cation-transporting ATPase *(ACA) & original description: none


Gene families : OG0000086 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000086_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sam_g35438

Target Alias Description ECC score Gene Family Method Actions
Ala_g16332 ACA8, AT-ACA8 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g02092 ACA11 P2B-type calcium cation-transporting ATPase *(ACA) &... 0.03 OrthoFinder output from all 47 species
Dac_g14710 ACA8, AT-ACA8 P2B-type calcium cation-transporting ATPase *(ACA) &... 0.02 OrthoFinder output from all 47 species
Gb_19256 ATACA10, CIF1, ACA10 Calcium-transporting ATPase 10, plasma membrane-type... 0.01 OrthoFinder output from all 47 species
Len_g21664 PEA1, ACA1 P2B-type calcium cation-transporting ATPase *(ACA) &... 0.02 OrthoFinder output from all 47 species
Len_g30013 ACA8, AT-ACA8 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Mp4g22320.1 ACA8, AT-ACA8 P2B-type calcium cation-transporting ATPase (ACA) 0.01 OrthoFinder output from all 47 species
Ore_g45477 ACA8, AT-ACA8 P2B-type calcium cation-transporting ATPase *(ACA) &... 0.02 OrthoFinder output from all 47 species
Tin_g14002 ACA8, AT-ACA8 P2B-type calcium cation-transporTing ATPase *(ACA) &... 0.02 OrthoFinder output from all 47 species
Tin_g34949 ACA8, AT-ACA8 not classified & original description: none 0.01 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003723 RNA binding IEP HCCA
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005524 ATP binding IEP HCCA
BP GO:0006996 organelle organization IEP HCCA
BP GO:0007062 sister chromatid cohesion IEP HCCA
BP GO:0007064 mitotic sister chromatid cohesion IEP HCCA
MF GO:0008094 ATP-dependent activity, acting on DNA IEP HCCA
MF GO:0008194 UDP-glycosyltransferase activity IEP HCCA
MF GO:0016740 transferase activity IEP HCCA
MF GO:0016779 nucleotidyltransferase activity IEP HCCA
MF GO:0019787 ubiquitin-like protein transferase activity IEP HCCA
BP GO:0022402 cell cycle process IEP HCCA
MF GO:0030554 adenyl nucleotide binding IEP HCCA
BP GO:0032446 protein modification by small protein conjugation IEP HCCA
MF GO:0032559 adenyl ribonucleotide binding IEP HCCA
BP GO:0051276 chromosome organization IEP HCCA
MF GO:0061659 ubiquitin-like protein ligase activity IEP HCCA
MF GO:0061666 UFM1 ligase activity IEP HCCA
MF GO:0070569 uridylyltransferase activity IEP HCCA
BP GO:0070647 protein modification by small protein conjugation or removal IEP HCCA
MF GO:0071568 UFM1 transferase activity IEP HCCA
BP GO:0071569 protein ufmylation IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:0140097 catalytic activity, acting on DNA IEP HCCA
MF GO:0140658 ATP-dependent chromatin remodeler activity IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
BP GO:1903047 mitotic cell cycle process IEP HCCA
InterPro domains Description Start Stop
IPR006068 ATPase_P-typ_cation-transptr_C 477 661
No external refs found!