Sam_g35360


Description : monosaccharide transporter *(STP) & original description: none


Gene families : OG0000074 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000074_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sam_g35360

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00065p00017520 evm_27.TU.AmTr_v1... Sugar transport protein MST6 OS=Oryza sativa subsp. japonica 0.02 OrthoFinder output from all 47 species
AT1G77210 AtSTP14, STP14 sugar transporter 14 0.02 OrthoFinder output from all 47 species
Adi_g018345 STP7 monosaccharide transporter *(STP) & original description: none 0.05 OrthoFinder output from all 47 species
Adi_g102238 STP7 monosaccharide transporter *(STP) & original description: none 0.04 OrthoFinder output from all 47 species
Aob_g28906 ATSTP13, MSS1, STP13 monosaccharide transporter *(STP) & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene29067.t1 Aspi01Gene29067 monosaccharide transporter *(STP) & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0076.g037759 STP7 monosaccharide transporter *(STP) & original... 0.03 OrthoFinder output from all 47 species
Azfi_s0090.g042677 STP7 monosaccharide transporter *(STP) & original... 0.03 OrthoFinder output from all 47 species
Cba_g75110 STP7 monosaccharide transporter *(STP) & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g22368 STP7 monosaccharide transporter *(STP) & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g22639 ATSTP13, MSS1, STP13 monosaccharide transporter *(STP) & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g17220 STP7 monosaccharide transporter *(STP) & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g17274 ATSTP13, MSS1, STP13 monosaccharide transporter *(STP) & original description: none 0.02 OrthoFinder output from all 47 species
LOC_Os10g41190.1 LOC_Os10g41190 monosaccharide transporter (STP) 0.02 OrthoFinder output from all 47 species
Msp_g35726 STP7 monosaccharide transporter *(STP) & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g43891 STP7 monosaccharide transporter *(STP) & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g29369 ATSTP13, MSS1, STP13 monosaccharide transporter *(STP) & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g66339 ATSTP13, MSS1, STP13 monosaccharide transporter *(STP) & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g18207 ATSTP1, STP1 monosaccharide transporter *(STP) & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g53328 ATSTP13, MSS1, STP13 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Smo187905 STP7 Solute transport.carrier-mediated transport.MFS... 0.03 OrthoFinder output from all 47 species
Zm00001e010900_P001 ATSTP1, STP1,... monosaccharide transporter (STP) 0.02 OrthoFinder output from all 47 species
Zm00001e020480_P001 ATSTP1, STP1,... monosaccharide transporter (STP) 0.02 OrthoFinder output from all 47 species
Zm00001e033084_P001 Zm00001e033084 monosaccharide transporter (STP) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
CC GO:0016020 membrane IEA Interproscan
MF GO:0022857 transmembrane transporter activity IEA Interproscan
BP GO:0055085 transmembrane transport IEA Interproscan
Type GO Term Name Evidence Source
BP GO:0000272 polysaccharide catabolic process IEP HCCA
BP GO:0005976 polysaccharide metabolic process IEP HCCA
BP GO:0006364 rRNA processing IEP HCCA
BP GO:0009057 macromolecule catabolic process IEP HCCA
BP GO:0016052 carbohydrate catabolic process IEP HCCA
BP GO:0016072 rRNA metabolic process IEP HCCA
MF GO:0016160 amylase activity IEP HCCA
MF GO:0016161 beta-amylase activity IEP HCCA
BP GO:0034470 ncRNA processing IEP HCCA
InterPro domains Description Start Stop
IPR005828 MFS_sugar_transport-like 33 492
No external refs found!