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  5. Sam_g35344

Sam_g35344


Description : phragmoplastin *(DRP1) & original description: none


Gene families : OG0001112 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001112_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sam_g35344

Target Alias Description ECC score Gene Family Method Actions
Azfi_s0004.g008868 EDR3, ADLP2,... phragmoplastin *(DRP1) & original description: CDS=250-1953 0.02 OrthoFinder output from all 47 species
Ceric.13G025700.1 EDR3, ADLP2,... phragmoplastin *(DRP1) & original description:... 0.03 OrthoFinder output from all 47 species
Dac_g15994 EDR3, ADLP2,... phragmoplastin *(DRP1) & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g03926 ADL1B, DL1B phragmoplastin *(DRP1) & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g06025 EDR3, ADLP2,... phragmoplastin *(DRP1) & original description: none 0.03 OrthoFinder output from all 47 species
LOC_Os05g48240.1 AG68, ADL1,... DRP1-type clathrin coated vesicle dynamin 0.03 OrthoFinder output from all 47 species
Lfl_g04823 EDR3, ADLP2,... phragmoplastin *(DRP1) & original description: none 0.02 OrthoFinder output from all 47 species
Mp1g11000.1 EDR3, ADLP2,... DRP1-type clathrin coated vesicle dynamin 0.02 OrthoFinder output from all 47 species
Mp4g10080.1 EDR3, ADLP2,... DRP1-type clathrin coated vesicle dynamin 0.02 OrthoFinder output from all 47 species
Nbi_g07016 EDR3, ADLP2,... phragmoplastin *(DRP1) & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g01653 EDR3, ADLP2,... phragmoplastin *(DRP1) & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g06426 EDR3, ADLP2,... phragmoplastin *(DRP1) & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0073.g017175 EDR3, ADLP2,... phragmoplastin *(DRP1) & original description: CDS=276-2105 0.02 OrthoFinder output from all 47 species
Spa_g09353 EDR3, ADLP2,... phragmoplastin *(DRP1) & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g18176 EDR3, ADLP2,... phragmoplastin *(DRP1) & original description: none 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003924 GTPase activity IEA Interproscan
MF GO:0005525 GTP binding IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0016043 cellular component organization IEP HCCA
MF GO:0016788 hydrolase activity, acting on ester bonds IEP HCCA
MF GO:0030599 pectinesterase activity IEP HCCA
BP GO:0042545 cell wall modification IEP HCCA
BP GO:0045229 external encapsulating structure organization IEP HCCA
MF GO:0052689 carboxylic ester hydrolase activity IEP HCCA
BP GO:0055085 transmembrane transport IEP HCCA
BP GO:0071554 cell wall organization or biogenesis IEP HCCA
BP GO:0071555 cell wall organization IEP HCCA
BP GO:0071840 cellular component organization or biogenesis IEP HCCA
InterPro domains Description Start Stop
IPR003130 GED 515 591
IPR000375 Dynamin_stalk 220 488
IPR045063 Dynamin_N 37 211
No external refs found!