Sam_g35326


Description : mitochondrial RNA splicing factor *(RUG3) & original description: none


Gene families : OG0007937 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0007937_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sam_g35326
Cluster HCCA: Cluster_146

Target Alias Description ECC score Gene Family Method Actions
AT5G60870 No alias Regulator of chromosome condensation (RCC1) family protein 0.02 OrthoFinder output from all 47 species
Adi_g109585 No alias mitochondrial RNA splicing factor *(RUG3) & original... 0.02 OrthoFinder output from all 47 species
Als_g29907 No alias mitochondrial RNA splicing factor *(RUG3) & original... 0.02 OrthoFinder output from all 47 species
Azfi_s0226.g058985 No alias mitochondrial RNA splicing factor *(RUG3) & original... 0.03 OrthoFinder output from all 47 species
Ceric.04G013900.1 Ceric.04G013900 mitochondrial RNA splicing factor *(RUG3) & original... 0.03 OrthoFinder output from all 47 species
Dcu_g02834 No alias mitochondrial RNA splicing factor *(RUG3) & original... 0.03 OrthoFinder output from all 47 species
Len_g50888 No alias mitochondrial RNA splicing factor *(RUG3) & original... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0004177 aminopeptidase activity IEP HCCA
MF GO:0004386 helicase activity IEP HCCA
MF GO:0005525 GTP binding IEP HCCA
MF GO:0008235 metalloexopeptidase activity IEP HCCA
MF GO:0008238 exopeptidase activity IEP HCCA
MF GO:0019001 guanyl nucleotide binding IEP HCCA
MF GO:0030145 manganese ion binding IEP HCCA
MF GO:0032561 guanyl ribonucleotide binding IEP HCCA
MF GO:0070006 metalloaminopeptidase activity IEP HCCA
InterPro domains Description Start Stop
IPR000408 Reg_chr_condens 108 134
IPR000408 Reg_chr_condens 290 344
IPR000408 Reg_chr_condens 452 502
IPR000408 Reg_chr_condens 237 287
IPR000408 Reg_chr_condens 399 448
IPR000408 Reg_chr_condens 187 234
IPR000408 Reg_chr_condens 348 396
No external refs found!