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  5. Sam_g35301

Sam_g35301


Description : not classified & original description: none


Gene families : OG0000050 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sam_g35301

Target Alias Description ECC score Gene Family Method Actions
AT3G05120 ATGID1A, GID1A alpha/beta-Hydrolases superfamily protein 0.02 OrthoFinder output from all 47 species
Adi_g013597 CXE17, AtCXE17 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g20962 CXE17, AtCXE17 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g13341 GID1B, ATGID1B not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g19214 ATGID1C, GID1C gibberellin receptor *(GID1) & original description: none 0.03 OrthoFinder output from all 47 species
Als_g56957 CXE17, AtCXE17 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g61483 CXE17, AtCXE17 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g37533 CXE17, AtCXE17 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g08839 ATCXE12, CXE12 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g09448 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene18811.t1 AtCXE18, CXE18,... not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene31584.t1 Aspi01Gene31584 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0001.g000559 ATGID1C, GID1C not classified & original description: CDS=107-1135 0.03 OrthoFinder output from all 47 species
Ceric.14G079500.1 ATCXE12, CXE12,... not classified & original description: pacid=50634451... 0.03 OrthoFinder output from all 47 species
Dac_g15804 ATGID1C, GID1C not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dac_g28568 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g02632 CXE17, AtCXE17 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g18131 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Gb_07795 AtCXE18, CXE18 Probable carboxylesterase 18 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Gb_17754 ATGID1C, GID1C Probable carboxylesterase 18 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
LOC_Os06g11130.1 LOC_Os06g11130 2-hydroxyisoflavanone dehydratase OS=Glycyrrhiza... 0.02 OrthoFinder output from all 47 species
LOC_Os09g28650.1 ATCXE12, CXE12,... Tuliposide A-converting enzyme b1, amyloplastic... 0.02 OrthoFinder output from all 47 species
Len_g29270 AtCXE18, CXE18 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g03815 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
MA_28455g0010 AtCXE18, CXE18 Probable carboxylesterase 18 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
MA_93044g0010 AtCXE18, CXE18 Probable carboxylesterase 18 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Nbi_g16857 ATGID1C, GID1C not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g01899 CXE13, ATCXE13 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g65458 CXE13, ATCXE13 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pnu_g17828 CXE17, AtCXE17 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g09890 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Solyc01g098390.3.1 ATGID1C, GID1C,... GID1-type gibberellin receptor 0.02 OrthoFinder output from all 47 species
Zm00001e009964_P001 Zm00001e009964 Tuliposide A-converting enzyme 1, chloroplastic... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0016787 hydrolase activity IEA Interproscan
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Type GO Term Name Evidence Source
CC GO:0005839 proteasome core complex IEP HCCA
BP GO:0006072 glycerol-3-phosphate metabolic process IEP HCCA
BP GO:0010257 NADH dehydrogenase complex assembly IEP HCCA
MF GO:0016491 oxidoreductase activity IEP HCCA
MF GO:0016614 oxidoreductase activity, acting on CH-OH group of donors IEP HCCA
MF GO:0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor IEP HCCA
BP GO:0022607 cellular component assembly IEP HCCA
BP GO:0032981 mitochondrial respiratory chain complex I assembly IEP HCCA
BP GO:0033108 mitochondrial respiratory chain complex assembly IEP HCCA
BP GO:0043933 protein-containing complex organization IEP HCCA
BP GO:0046168 glycerol-3-phosphate catabolic process IEP HCCA
BP GO:0046434 organophosphate catabolic process IEP HCCA
MF GO:0051287 NAD binding IEP HCCA
BP GO:0051603 proteolysis involved in protein catabolic process IEP HCCA
BP GO:0052646 alditol phosphate metabolic process IEP HCCA
BP GO:0065003 protein-containing complex assembly IEP HCCA
CC GO:0140535 intracellular protein-containing complex IEP HCCA
BP GO:1901135 carbohydrate derivative metabolic process IEP HCCA
BP GO:1901136 carbohydrate derivative catabolic process IEP HCCA
InterPro domains Description Start Stop
IPR013094 AB_hydrolase_3 94 370
No external refs found!