Sam_g35111


Description : motility factor *(CHUP) & original description: none


Gene families : OG0001103 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001103_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sam_g35111

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00045p00113980 evm_27.TU.AmTr_v1... Protein CHUP1, chloroplastic OS=Arabidopsis thaliana 0.05 OrthoFinder output from all 47 species
Ala_g13466 CHUP1 motility factor *(CHUP) & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g25523 CHUP1 motility factor *(CHUP) & original description: none 0.03 OrthoFinder output from all 47 species
Als_g07778 CHUP1 motility factor *(CHUP) & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g04082 CHUP1 motility factor *(CHUP) & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.38G053600.1 CHUP1, Ceric.38G053600 not classified & original description: pacid=50580110... 0.05 OrthoFinder output from all 47 species
Lfl_g39509 CHUP1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g29623 CHUP1 motility factor *(CHUP) & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g12617 CHUP1 motility factor *(CHUP) & original description: none 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0025.g009425 CHUP1 motility factor *(CHUP) & original description: CDS=372-3407 0.03 OrthoFinder output from all 47 species
Sam_g09064 No alias motility factor *(CHUP) & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g25235 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e001328_P002 Zm00001e001328 Protein CHUP1, chloroplastic OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Zm00001e020303_P001 Zm00001e020303 regulatory protein (IPGA) of cortical microtubule organisation 0.02 OrthoFinder output from all 47 species
Zm00001e038406_P001 Zm00001e038406 Protein CHUP1, chloroplastic OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0004497 monooxygenase activity IEP HCCA
MF GO:0005215 transporter activity IEP HCCA
MF GO:0005506 iron ion binding IEP HCCA
BP GO:0006810 transport IEP HCCA
BP GO:0007034 vacuolar transport IEP HCCA
BP GO:0009719 response to endogenous stimulus IEP HCCA
BP GO:0009725 response to hormone IEP HCCA
BP GO:0010033 response to organic substance IEP HCCA
MF GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEP HCCA
MF GO:0020037 heme binding IEP HCCA
MF GO:0022857 transmembrane transporter activity IEP HCCA
BP GO:0042221 response to chemical IEP HCCA
MF GO:0046906 tetrapyrrole binding IEP HCCA
MF GO:0046914 transition metal ion binding IEP HCCA
BP GO:0051179 localization IEP HCCA
BP GO:0051234 establishment of localization IEP HCCA
BP GO:0055085 transmembrane transport IEP HCCA

No InterPro domains available for this sequence

No external refs found!