Sam_g35106


Description : not classified & original description: none


Gene families : OG0008326 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0008326_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sam_g35106

Target Alias Description ECC score Gene Family Method Actions
Aop_g03679 No alias regulatory factor *(PRIN2) of plastid-encoded RNA... 0.02 OrthoFinder output from all 47 species
Aspi01Gene00656.t1 Aspi01Gene00656 regulatory factor *(PRIN2) of plastid-encoded RNA... 0.02 OrthoFinder output from all 47 species
Cba_g01584 No alias regulatory factor *(PRIN2) of plastid-encoded RNA... 0.02 OrthoFinder output from all 47 species
Dac_g03515 No alias regulatory factor *(PRIN2) of plastid-encoded RNA... 0.02 OrthoFinder output from all 47 species
Dde_g14880 No alias regulatory factor *(PRIN2) of plastid-encoded RNA... 0.03 OrthoFinder output from all 47 species
LOC_Os09g21460.1 LOC_Os09g21460 component PRIN2 of plastid-encoded RNA polymerase 0.02 OrthoFinder output from all 47 species
Mp2g05600.1 No alias component PRIN2 of plastid-encoded RNA polymerase 0.01 OrthoFinder output from all 47 species
Nbi_g38061 No alias regulatory factor *(PRIN2) of plastid-encoded RNA... 0.02 OrthoFinder output from all 47 species
Pir_g11027 No alias regulatory factor *(PRIN2) of plastid-encoded RNA... 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0038.g012000 No alias not classified & original description: CDS=272-829 0.03 OrthoFinder output from all 47 species
Solyc05g006110.3.1 Solyc05g006110 component PRIN2 of plastid-encoded RNA polymerase 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP HCCA
MF GO:0004497 monooxygenase activity IEP HCCA
MF GO:0004601 peroxidase activity IEP HCCA
MF GO:0004602 glutathione peroxidase activity IEP HCCA
BP GO:0006950 response to stress IEP HCCA
BP GO:0006979 response to oxidative stress IEP HCCA
MF GO:0008194 UDP-glycosyltransferase activity IEP HCCA
MF GO:0016209 antioxidant activity IEP HCCA
MF GO:0016491 oxidoreductase activity IEP HCCA
MF GO:0016684 oxidoreductase activity, acting on peroxide as acceptor IEP HCCA
MF GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEP HCCA
MF GO:0046872 metal ion binding IEP HCCA
MF GO:0046914 transition metal ion binding IEP HCCA

No InterPro domains available for this sequence

No external refs found!