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  5. Lfl_g28834

Lfl_g28834 (AtPP2-A13, PP2-A13)


Aliases : AtPP2-A13, PP2-A13

Description : not classified & original description: none


Gene families : OG0000279 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000279_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Lfl_g28834

Target Alias Description ECC score Gene Family Method Actions
GSVIVT01003903001 No alias No description available 0.03 OrthoFinder output from all 47 species
MA_179528g0010 MEE66 F-box protein PP2-B15 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Mp3g01690.1 PP2-A15, AtPP2-A15 F-box protein PP2-A15 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Pir_g33736 PP2-B15, AtPP2-B15 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g35801 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0078.g017743 PP2-A15, AtPP2-A15 not classified & original description: CDS=224-1150 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEP HCCA
MF GO:0004843 cysteine-type deubiquitinase activity IEP HCCA
MF GO:0008168 methyltransferase activity IEP HCCA
MF GO:0008171 O-methyltransferase activity IEP HCCA
MF GO:0008234 cysteine-type peptidase activity IEP HCCA
BP GO:0016579 protein deubiquitination IEP HCCA
MF GO:0016741 transferase activity, transferring one-carbon groups IEP HCCA
MF GO:0019783 ubiquitin-like protein peptidase activity IEP HCCA
MF GO:0043565 sequence-specific DNA binding IEP HCCA
BP GO:0070646 protein modification by small protein removal IEP HCCA
BP GO:0070647 protein modification by small protein conjugation or removal IEP HCCA
MF GO:0101005 deubiquitinase activity IEP HCCA
InterPro domains Description Start Stop
IPR001810 F-box_dom 65 103
IPR025886 PP2-like 160 316
No external refs found!