Sam_g34751


Description : not classified & original description: none


Gene families : OG0000204 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000204_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sam_g34751

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00119p00074870 MIF2,... RNA biosynthesis.transcriptional activation.HB... 0.02 OrthoFinder output from all 47 species
AT5G42780 HB27, ZHD13, AtHB27 homeobox protein 27 0.02 OrthoFinder output from all 47 species
AT5G60480 HB26, ZHD12, AtHB26 homeobox protein 26 0.02 OrthoFinder output from all 47 species
Aob_g04998 ATHB22, MEE68, ZHD2, HB22 zf-HD-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene22700.t1 AtHB24, ZHD6,... zf-HD-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0116.g046426 ATHB22, MEE68, ZHD2, HB22 zf-HD-type transcription factor & original description:... 0.05 OrthoFinder output from all 47 species
Ceric.20G036600.1 AtHB31, ZHD4,... zf-HD-type transcription factor & original description:... 0.03 OrthoFinder output from all 47 species
Ehy_g03341 AtHB31, ZHD4, HB31 zf-HD-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Gb_30985 ATHB22, MEE68, ZHD2, HB22 transcription factor (zf-HD) 0.02 OrthoFinder output from all 47 species
Lfl_g30980 ATHB22, MEE68, ZHD2, HB22 zf-HD-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
MA_19630g0030 AtHB31, ZHD4, HB31 transcription factor (zf-HD) 0.02 OrthoFinder output from all 47 species
MA_461761g0010 AtHB31, ZHD4, HB31 transcription factor (zf-HD) 0.03 OrthoFinder output from all 47 species
MA_69304g0010 ATHB22, MEE68, ZHD2, HB22 transcription factor (zf-HD) 0.03 OrthoFinder output from all 47 species
Msp_g23164 ATHB22, MEE68, ZHD2, HB22 zf-HD-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g02734 AtHB31, ZHD4, HB31 zf-HD-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0003.g001722 ATHB22, MEE68, ZHD2, HB22 zf-HD-type transcription factor & original description:... 0.02 OrthoFinder output from all 47 species
Spa_g41230 ATHB22, MEE68, ZHD2, HB22 zf-HD-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e034407_P001 ATHB22, MEE68,... transcription factor (zf-HD) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0003864 3-methyl-2-oxobutanoate hydroxymethyltransferase activity IEP HCCA
BP GO:0006575 cellular modified amino acid metabolic process IEP HCCA
BP GO:0006766 vitamin metabolic process IEP HCCA
BP GO:0006767 water-soluble vitamin metabolic process IEP HCCA
BP GO:0009110 vitamin biosynthetic process IEP HCCA
BP GO:0015939 pantothenate metabolic process IEP HCCA
BP GO:0015940 pantothenate biosynthetic process IEP HCCA
CC GO:0016020 membrane IEP HCCA
BP GO:0016053 organic acid biosynthetic process IEP HCCA
MF GO:0016740 transferase activity IEP HCCA
MF GO:0016742 hydroxymethyl-, formyl- and related transferase activity IEP HCCA
MF GO:0016765 transferase activity, transferring alkyl or aryl (other than methyl) groups IEP HCCA
BP GO:0032787 monocarboxylic acid metabolic process IEP HCCA
BP GO:0042364 water-soluble vitamin biosynthetic process IEP HCCA
BP GO:0042398 cellular modified amino acid biosynthetic process IEP HCCA
BP GO:0044283 small molecule biosynthetic process IEP HCCA
BP GO:0046394 carboxylic acid biosynthetic process IEP HCCA
BP GO:0072330 monocarboxylic acid biosynthetic process IEP HCCA

No InterPro domains available for this sequence

No external refs found!