Sam_g34606


Description : not classified & original description: none


Gene families : OG0000748 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000748_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sam_g34606
Cluster HCCA: Cluster_136

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00046p00230650 evm_27.TU.AmTr_v1... Glycine-rich domain-containing protein 1 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
Ala_g11530 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g11531 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g20711 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Azfi_s0015.g013981 No alias not classified & original description: CDS=321-2831 0.03 OrthoFinder output from all 47 species
Azfi_s0119.g046687 No alias not classified & original description: CDS=108-1874 0.05 OrthoFinder output from all 47 species
Ceric.20G016300.1 Ceric.20G016300 not classified & original description: pacid=50567047... 0.04 OrthoFinder output from all 47 species
Ceric.20G016500.1 Ceric.20G016500 not classified & original description: pacid=50566368... 0.05 OrthoFinder output from all 47 species
Ceric.20G016700.1 Ceric.20G016700 not classified & original description: pacid=50567234... 0.02 OrthoFinder output from all 47 species
Ceric.20G016800.1 Ceric.20G016800 not classified & original description: pacid=50566388... 0.04 OrthoFinder output from all 47 species
Ceric.20G017300.1 Ceric.20G017300 not classified & original description: pacid=50567270... 0.02 OrthoFinder output from all 47 species
Ceric.30G026300.1 Ceric.30G026300 not classified & original description: pacid=50608608... 0.02 OrthoFinder output from all 47 species
Ceric.30G026600.1 Ceric.30G026600 not classified & original description: pacid=50608946... 0.02 OrthoFinder output from all 47 species
Dac_g08323 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g45503 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g14619 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g46472 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01031161001 No alias Glycine-rich domain-containing protein 1 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
Lfl_g11921 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g36383 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Mp6g11850.1 No alias Glycine-rich domain-containing protein 1 OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species
Msp_g16098 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g47128 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g29526 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0035.g011450 No alias not classified & original description: CDS=134-3274 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0036.g011691 No alias not classified & original description: CDS=87-2417 0.03 OrthoFinder output from all 47 species
Solyc02g063450.4.1 Solyc02g063450 Glycine-rich domain-containing protein 2 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
Solyc02g091650.4.1 Solyc02g091650 Glycine-rich domain-containing protein 2 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
Tin_g07539 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Zm00001e017610_P002 Zm00001e017610 no hits & (original description: none) 0.01 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0004664 prephenate dehydratase activity IEP HCCA
MF GO:0004842 ubiquitin-protein transferase activity IEP HCCA
BP GO:0006558 L-phenylalanine metabolic process IEP HCCA
BP GO:0008152 metabolic process IEP HCCA
BP GO:0008652 amino acid biosynthetic process IEP HCCA
BP GO:0009072 aromatic amino acid metabolic process IEP HCCA
BP GO:0009073 aromatic amino acid family biosynthetic process IEP HCCA
BP GO:0009094 L-phenylalanine biosynthetic process IEP HCCA
BP GO:0009095 aromatic amino acid family biosynthetic process, prephenate pathway IEP HCCA
BP GO:0016053 organic acid biosynthetic process IEP HCCA
BP GO:0016567 protein ubiquitination IEP HCCA
MF GO:0016701 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen IEP HCCA
MF GO:0016702 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen IEP HCCA
MF GO:0016835 carbon-oxygen lyase activity IEP HCCA
MF GO:0016836 hydro-lyase activity IEP HCCA
MF GO:0019787 ubiquitin-like protein transferase activity IEP HCCA
BP GO:0032446 protein modification by small protein conjugation IEP HCCA
BP GO:0036211 protein modification process IEP HCCA
BP GO:0043412 macromolecule modification IEP HCCA
BP GO:0044238 primary metabolic process IEP HCCA
BP GO:0046394 carboxylic acid biosynthetic process IEP HCCA
MF GO:0051213 dioxygenase activity IEP HCCA
BP GO:0070647 protein modification by small protein conjugation or removal IEP HCCA
BP GO:0071704 organic substance metabolic process IEP HCCA
BP GO:1901605 alpha-amino acid metabolic process IEP HCCA
BP GO:1901607 alpha-amino acid biosynthetic process IEP HCCA
BP GO:1902221 erythrose 4-phosphate/phosphoenolpyruvate family amino acid metabolic process IEP HCCA
BP GO:1902223 erythrose 4-phosphate/phosphoenolpyruvate family amino acid biosynthetic process IEP HCCA

No InterPro domains available for this sequence

No external refs found!