Sam_g34100


Description : not classified & original description: none


Gene families : OG0000034 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sam_g34100

Target Alias Description ECC score Gene Family Method Actions
Aev_g21751 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g13505 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Aspi01Gene07288.t1 Aspi01Gene07288 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene22917.t1 Aspi01Gene22917 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g06648 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g10106 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g17887 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g21019 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g79039 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g20982 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g40226 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g48397 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g27072 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Gb_27410 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Len_g23922 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g01426 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g19019 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g51470 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g33544 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0008.g004102 No alias not classified & original description: CDS=1-732 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0034.g011177 No alias not classified & original description: CDS=1-636 0.02 OrthoFinder output from all 47 species
Sam_g15689 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g29698 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g16876 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g29723 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g29806 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
BP GO:0000096 sulfur amino acid metabolic process IEP HCCA
MF GO:0000155 phosphorelay sensor kinase activity IEP HCCA
MF GO:0004673 protein histidine kinase activity IEP HCCA
BP GO:0006520 amino acid metabolic process IEP HCCA
BP GO:0006534 cysteine metabolic process IEP HCCA
BP GO:0006790 sulfur compound metabolic process IEP HCCA
BP GO:0007165 signal transduction IEP HCCA
BP GO:0009069 serine family amino acid metabolic process IEP HCCA
BP GO:0009092 homoserine metabolic process IEP HCCA
MF GO:0016775 phosphotransferase activity, nitrogenous group as acceptor IEP HCCA
MF GO:0016872 intramolecular lyase activity IEP HCCA
BP GO:0019346 transsulfuration IEP HCCA
MF GO:0019842 vitamin binding IEP HCCA
MF GO:0030170 pyridoxal phosphate binding IEP HCCA
BP GO:0050667 homocysteine metabolic process IEP HCCA
MF GO:0070279 vitamin B6 binding IEP HCCA
MF GO:0140299 small molecule sensor activity IEP HCCA
BP GO:1901605 alpha-amino acid metabolic process IEP HCCA

No InterPro domains available for this sequence

No external refs found!