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  5. Sam_g32934

Sam_g32934


Description : EC_3.4 hydrolase acting on peptide bond (peptidase) & original description: none


Gene families : OG0003730 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003730_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sam_g32934

Target Alias Description ECC score Gene Family Method Actions
AT1G09300 No alias Metallopeptidase M24 family protein 0.03 OrthoFinder output from all 47 species
Als_g27261 No alias EC_3.4 hydrolase acting on peptide bond (peptidase) &... 0.02 OrthoFinder output from all 47 species
Azfi_s0035.g025469 No alias EC_3.4 hydrolase acting on peptide bond (peptidase) &... 0.03 OrthoFinder output from all 47 species
Azfi_s0229.g059091 No alias EC_3.4 hydrolase acting on peptide bond (peptidase) &... 0.07 OrthoFinder output from all 47 species
Ceric.05G001300.1 Ceric.05G001300 EC_3.4 hydrolase acting on peptide bond (peptidase) &... 0.07 OrthoFinder output from all 47 species
Ceric.1Z235100.1 Ceric.1Z235100 EC_3.4 hydrolase acting on peptide bond (peptidase) &... 0.01 OrthoFinder output from all 47 species
Dac_g17076 No alias EC_3.4 hydrolase acting on peptide bond (peptidase) &... 0.05 OrthoFinder output from all 47 species
GSVIVT01031262001 No alias Protein modification.peptide... 0.03 OrthoFinder output from all 47 species
Len_g08982 No alias EC_3.4 hydrolase acting on peptide bond (peptidase) &... 0.03 OrthoFinder output from all 47 species
Msp_g25943 No alias EC_3.4 hydrolase acting on peptide bond (peptidase) &... 0.02 OrthoFinder output from all 47 species
Nbi_g12143 No alias EC_3.4 hydrolase acting on peptide bond (peptidase) &... 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0003.g001787 No alias EC_3.4 hydrolase acting on peptide bond (peptidase) &... 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0018.g007505 No alias EC_3.4 hydrolase acting on peptide bond (peptidase) &... 0.06 OrthoFinder output from all 47 species
Smo89300 No alias Protein modification.peptide... 0.03 OrthoFinder output from all 47 species
Solyc01g100740.4.1 Solyc01g100740 preprotein processing peptidase (ICP55) 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0030145 manganese ion binding IEA Interproscan
MF GO:0070006 metalloaminopeptidase activity IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0000075 cell cycle checkpoint signaling IEP HCCA
BP GO:0000077 DNA damage checkpoint signaling IEP HCCA
BP GO:0001522 pseudouridine synthesis IEP HCCA
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003723 RNA binding IEP HCCA
MF GO:0005525 GTP binding IEP HCCA
BP GO:0006974 cellular response to DNA damage stimulus IEP HCCA
BP GO:0009451 RNA modification IEP HCCA
MF GO:0009982 pseudouridine synthase activity IEP HCCA
BP GO:0010564 regulation of cell cycle process IEP HCCA
BP GO:0010948 negative regulation of cell cycle process IEP HCCA
MF GO:0016866 intramolecular transferase activity IEP HCCA
MF GO:0019001 guanyl nucleotide binding IEP HCCA
CC GO:0030896 checkpoint clamp complex IEP HCCA
BP GO:0031570 DNA integrity checkpoint signaling IEP HCCA
MF GO:0032561 guanyl ribonucleotide binding IEP HCCA
BP GO:0033554 cellular response to stress IEP HCCA
BP GO:0035556 intracellular signal transduction IEP HCCA
BP GO:0042770 signal transduction in response to DNA damage IEP HCCA
BP GO:0045786 negative regulation of cell cycle IEP HCCA
BP GO:0048519 negative regulation of biological process IEP HCCA
BP GO:0048523 negative regulation of cellular process IEP HCCA
BP GO:0051716 cellular response to stimulus IEP HCCA
BP GO:0051726 regulation of cell cycle IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
BP GO:1901987 regulation of cell cycle phase transition IEP HCCA
BP GO:1901988 negative regulation of cell cycle phase transition IEP HCCA
InterPro domains Description Start Stop
IPR000994 Pept_M24 131 276
IPR007865 Aminopep_P_N 1 83
No external refs found!