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  5. Lfl_g28621

Lfl_g28621 (CAM3, acam-3)


Aliases : CAM3, acam-3

Description : calcium sensor *(CML) & original description: none


Gene families : OG0000295 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000295_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Lfl_g28621

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00024p00073390 CAM3, acam-3,... Calmodulin OS=Solanum lycopersicum 0.04 OrthoFinder output from all 47 species
AT1G66410 ACAM-4, CAM4 calmodulin 4 0.03 OrthoFinder output from all 47 species
AT2G27030 ACAM-2, CAM5 calmodulin 5 0.04 OrthoFinder output from all 47 species
AT3G43810 CAM7 calmodulin 7 0.02 OrthoFinder output from all 47 species
AT3G56800 CAM3, acam-3 calmodulin 3 0.01 OrthoFinder output from all 47 species
AT5G21274 ACAM-6, CAM6 calmodulin 6 0.03 OrthoFinder output from all 47 species
AT5G37780 TCH1, CAM1, ACAM-1 calmodulin 1 0.03 OrthoFinder output from all 47 species
Adi_g002632 ACAM-6, CAM6 calcium sensor *(CML) & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g021511 ACAM-6, CAM6 calcium sensor *(CML) & original description: none 0.06 OrthoFinder output from all 47 species
Adi_g045838 CAM3, acam-3 calcium sensor *(CML) & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g051294 ACAM-6, CAM6 calcium sensor *(CML) & original description: none 0.04 OrthoFinder output from all 47 species
Adi_g075531 ACAM-6, CAM6 calcium sensor *(CML) & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g26311 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g09412 CAM3, acam-3 calcium sensor *(CML) & original description: none 0.04 OrthoFinder output from all 47 species
Als_g36890 CAM3, acam-3 calcium sensor *(CML) & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g06311 ACAM-6, CAM6 calcium sensor *(CML) & original description: none 0.02 OrthoFinder output from all 47 species
Azfi_s0080.g038455 No alias not classified & original description: CDS=276-527 0.03 OrthoFinder output from all 47 species
Ceric.01G015900.1 CAM3, acam-3,... calcium sensor *(CML) & original description:... 0.03 OrthoFinder output from all 47 species
Ceric.20G013100.1 CAM3, acam-3,... calcium sensor *(CML) & original description:... 0.03 OrthoFinder output from all 47 species
Dcu_g00320 CAM3, acam-3 calcium sensor *(CML) & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01021797001 ACAM-6, CAM6 Calmodulin-like protein 11 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
GSVIVT01037418001 ACAM-2, CAM5 Calmodulin-related protein OS=Petunia hybrida 0.04 OrthoFinder output from all 47 species
Gb_30717 CAM3, acam-3 Calmodulin OS=Hordeum vulgare (sp|p62162|calm_horvu : 292.0) 0.01 OrthoFinder output from all 47 species
LOC_Os01g17190.1 ACAM-6, CAM6,... Calmodulin-related protein OS=Petunia hybrida... 0.02 OrthoFinder output from all 47 species
LOC_Os01g59530.1 ACAM-2, CAM5,... Calmodulin-like protein 1 OS=Oryza sativa subsp.... 0.03 OrthoFinder output from all 47 species
MA_66144g0010 CAM3, acam-3 Calmodulin-related protein OS=Petunia hybrida... 0.03 OrthoFinder output from all 47 species
Mp1g00920.1 ACAM-6, CAM6 Calmodulin-related protein OS=Petunia hybrida... 0.02 OrthoFinder output from all 47 species
Ore_g36583 ATCAL5, CAM2 calcium sensor *(CML) & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g28058 ACAM-6, CAM6 calcium sensor *(CML) & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g42204 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0185.g025014 ACAM-6, CAM6 calcium sensor *(CML) & original description: CDS=158-607 0.03 OrthoFinder output from all 47 species
Smo141966 CAM3, acam-3 Calmodulin-1 OS=Oryza sativa subsp. indica 0.03 OrthoFinder output from all 47 species
Smo181303 ACAM-6, CAM6 Calmodulin OS=Lilium longiflorum 0.03 OrthoFinder output from all 47 species
Spa_g38969 ACAM-6, CAM6 calcium sensor *(CML) & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g26354 CAM3, acam-3 calcium sensor *(CML) & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e019509_P001 ACAM-2, CAM5,... Calmodulin-like protein 1 OS=Oryza sativa subsp. indica... 0.02 OrthoFinder output from all 47 species
Zm00001e027331_P001 ACAM-6, CAM6,... Calmodulin-related protein OS=Petunia hybrida... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005509 calcium ion binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP HCCA
MF GO:0003924 GTPase activity IEP HCCA
MF GO:0005525 GTP binding IEP HCCA
MF GO:0016462 pyrophosphatase activity IEP HCCA
MF GO:0016787 hydrolase activity IEP HCCA
MF GO:0016817 hydrolase activity, acting on acid anhydrides IEP HCCA
MF GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
MF GO:0017111 ribonucleoside triphosphate phosphatase activity IEP HCCA
MF GO:0019001 guanyl nucleotide binding IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
MF GO:0032561 guanyl ribonucleotide binding IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
MF GO:0043168 anion binding IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
InterPro domains Description Start Stop
IPR002048 EF_hand_dom 83 137
IPR002048 EF_hand_dom 12 73
No external refs found!