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  5. Lfl_g28590

Lfl_g28590 (PAK, ARK3)


Aliases : PAK, ARK3

Description : Kinesin-U-type motor protein & original description: none


Gene families : OG0000122 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000122_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Lfl_g28590

Target Alias Description ECC score Gene Family Method Actions
Adi_g057141 No alias Kinesin-7-type motor protein & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g00819 POK1 Kinesin-12-type motor protein & original description: none 0.02 OrthoFinder output from all 47 species
Azfi_s0024.g020287 POK2 Kinesin-12-type motor protein & original description:... 0.02 OrthoFinder output from all 47 species
Cpa|evm.model.tig00000383.82 POK2 Kinesin-like protein FLA10 OS=Chlamydomonas reinhardtii 0.02 OrthoFinder output from all 47 species
Cpa|evm.model.tig00000692.13 No alias Cytoskeleton.microtubular network.Kinesin... 0.01 OrthoFinder output from all 47 species
Cre09.g415450 No alias Kinesin-like protein FLA10 OS=Chlamydomonas reinhardtii 0.02 OrthoFinder output from all 47 species
Dac_g33010 POK1 Kinesin-12-type motor protein & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g38695 PAK, ARK3 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Sacu_v1.1_s0082.g018078 POK2 not classified & original description: CDS=174-2231 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003777 microtubule motor activity IEA Interproscan
MF GO:0005524 ATP binding IEA Interproscan
BP GO:0007018 microtubule-based movement IEA Interproscan
MF GO:0008017 microtubule binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003723 RNA binding IEP HCCA
MF GO:0004842 ubiquitin-protein transferase activity IEP HCCA
BP GO:0006139 nucleobase-containing compound metabolic process IEP HCCA
BP GO:0006354 DNA-templated transcription elongation IEP HCCA
BP GO:0006368 transcription elongation by RNA polymerase II IEP HCCA
BP GO:0006725 cellular aromatic compound metabolic process IEP HCCA
CC GO:0008023 transcription elongation factor complex IEP HCCA
BP GO:0016070 RNA metabolic process IEP HCCA
BP GO:0016567 protein ubiquitination IEP HCCA
BP GO:0016570 histone modification IEP HCCA
CC GO:0016593 Cdc73/Paf1 complex IEP HCCA
MF GO:0019787 ubiquitin-like protein transferase activity IEP HCCA
BP GO:0032446 protein modification by small protein conjugation IEP HCCA
BP GO:0032774 RNA biosynthetic process IEP HCCA
BP GO:0036211 protein modification process IEP HCCA
BP GO:0046483 heterocycle metabolic process IEP HCCA
BP GO:0070647 protein modification by small protein conjugation or removal IEP HCCA
BP GO:0090304 nucleic acid metabolic process IEP HCCA
CC GO:0140513 nuclear protein-containing complex IEP HCCA
BP GO:1901360 organic cyclic compound metabolic process IEP HCCA
InterPro domains Description Start Stop
IPR001752 Kinesin_motor_dom 47 388
No external refs found!