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  5. Sam_g32026

Sam_g32026


Description : not classified & original description: none


Gene families : OG0000513 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000513_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sam_g32026

Target Alias Description ECC score Gene Family Method Actions
AT5G47550 No alias Cystatin/monellin superfamily protein 0.03 OrthoFinder output from all 47 species
Ala_g32438 CYSB, ATCYS6, ATCYSB Cystatin protease inhibitor & original description: none 0.03 OrthoFinder output from all 47 species
Als_g34846 CYSB, ATCYS6, ATCYSB Cystatin protease inhibitor & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g13031 No alias Cystatin protease inhibitor & original description: none 0.05 OrthoFinder output from all 47 species
Ehy_g21926 CYSB, ATCYS6, ATCYSB Cystatin protease inhibitor & original description: none 0.02 OrthoFinder output from all 47 species
LOC_Os03g11170.1 LOC_Os03g11170 Putative cysteine proteinase inhibitor 7 OS=Oryza sativa... 0.02 OrthoFinder output from all 47 species
MA_43044g0010 ATCYSA, CYSA, FL3-27 Cystatin-1 OS=Zea mays (sp|p31726|cyt1_maize : 110.0) 0.01 OrthoFinder output from all 47 species
MA_8642111g0010 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
MA_88557g0010 CYSB, ATCYS6, ATCYSB Cystatin-1 OS=Zea mays (sp|p31726|cyt1_maize : 107.0) 0.03 OrthoFinder output from all 47 species
Msp_g43924 ATCYSA, CYSA, FL3-27 Cystatin protease inhibitor & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g34650 CYSB, ATCYS6, ATCYSB not classified & original description: none 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEP HCCA
MF GO:0004650 polygalacturonase activity IEP HCCA
BP GO:0006996 organelle organization IEP HCCA
BP GO:0032392 DNA geometric change IEP HCCA
BP GO:0032508 DNA duplex unwinding IEP HCCA
MF GO:0046983 protein dimerization activity IEP HCCA
BP GO:0051276 chromosome organization IEP HCCA
BP GO:0071103 DNA conformation change IEP HCCA

No InterPro domains available for this sequence

No external refs found!