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  5. Sam_g31562

Sam_g31562


Description : peptidyl-prolyl cis-trans isomerase *(ROF) & original description: none


Gene families : OG0000169 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000169_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sam_g31562

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00135p00035680 evm_27.TU.AmTr_v1... Protein modification.protein folding and quality... 0.02 OrthoFinder output from all 47 species
Cba_g66337 FKBP12, ATFKBP12 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cre13.g586300 FKBP62, ROF1, ATFKBP62 Protein modification.protein folding and quality... 0.01 OrthoFinder output from all 47 species
Mp6g20890.1 FKBP12, ATFKBP12 protein folding catalyst (FKBP) 0.02 OrthoFinder output from all 47 species
Sam_g25763 No alias peptidyl-prolyl cis-trans isomerase *(ROF) & original... 0.03 OrthoFinder output from all 47 species
Sam_g26012 No alias peptidyl-prolyl cis-trans isomerase *(FKBP12) & original... 0.03 OrthoFinder output from all 47 species
Sam_g35633 No alias peptidyl-prolyl cis-trans isomerase *(FKBP12) & original... 0.05 OrthoFinder output from all 47 species
Sam_g46214 No alias peptidyl-prolyl cis-trans isomerase *(FKBP12) & original... 0.06 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003755 peptidyl-prolyl cis-trans isomerase activity IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003779 actin binding IEP HCCA
MF GO:0004478 methionine adenosyltransferase activity IEP HCCA
MF GO:0005509 calcium ion binding IEP HCCA
CC GO:0005575 cellular_component IEP HCCA
CC GO:0005861 troponin complex IEP HCCA
CC GO:0005875 microtubule associated complex IEP HCCA
BP GO:0006556 S-adenosylmethionine biosynthetic process IEP HCCA
BP GO:0006790 sulfur compound metabolic process IEP HCCA
BP GO:0007017 microtubule-based process IEP HCCA
BP GO:0008150 biological_process IEP HCCA
BP GO:0009987 cellular process IEP HCCA
MF GO:0016765 transferase activity, transferring alkyl or aryl (other than methyl) groups IEP HCCA
CC GO:0030286 dynein complex IEP HCCA
BP GO:0031110 regulation of microtubule polymerization or depolymerization IEP HCCA
BP GO:0032886 regulation of microtubule-based process IEP HCCA
CC GO:0032991 protein-containing complex IEP HCCA
BP GO:0033043 regulation of organelle organization IEP HCCA
CC GO:0033177 proton-transporting two-sector ATPase complex, proton-transporting domain IEP HCCA
BP GO:0034220 monoatomic ion transmembrane transport IEP HCCA
MF GO:0043169 cation binding IEP HCCA
BP GO:0044272 sulfur compound biosynthetic process IEP HCCA
BP GO:0046500 S-adenosylmethionine metabolic process IEP HCCA
MF GO:0046872 metal ion binding IEP HCCA
BP GO:0051128 regulation of cellular component organization IEP HCCA
BP GO:0051493 regulation of cytoskeleton organization IEP HCCA
BP GO:0070507 regulation of microtubule cytoskeleton organization IEP HCCA
BP GO:0098655 monoatomic cation transmembrane transport IEP HCCA
CC GO:1902494 catalytic complex IEP HCCA
BP GO:1902600 proton transmembrane transport IEP HCCA
InterPro domains Description Start Stop
IPR001179 PPIase_FKBP_dom 14 104
No external refs found!