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  5. Sam_g31249

Sam_g31249


Description : component *(eS25) of small ribosomal-subunit (SSU) proteome & original description: none


Gene families : OG0000493 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000493_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sam_g31249

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00011p00198170 evm_27.TU.AmTr_v1... Protein biosynthesis.cytosolic ribosome.small subunit... 0.03 OrthoFinder output from all 47 species
AT2G21580 No alias Ribosomal protein S25 family protein 0.02 OrthoFinder output from all 47 species
AT4G34555 No alias Ribosomal protein S25 family protein 0.04 OrthoFinder output from all 47 species
AT4G39200 No alias Ribosomal protein S25 family protein 0.04 OrthoFinder output from all 47 species
Adi_g007622 No alias component *(eS25) of small ribosomal-subunit (SSU)... 0.02 OrthoFinder output from all 47 species
Aev_g43912 No alias component *(eS25) of small ribosomal-subunit (SSU)... 0.03 OrthoFinder output from all 47 species
Aob_g24251 No alias component *(eS25) of small ribosomal-subunit (SSU)... 0.02 OrthoFinder output from all 47 species
Aop_g06428 No alias component *(eS25) of small ribosomal-subunit (SSU)... 0.02 OrthoFinder output from all 47 species
Aop_g34553 No alias component *(eS25) of small ribosomal-subunit (SSU)... 0.03 OrthoFinder output from all 47 species
Cba_g45431 No alias component *(eS25) of small ribosomal-subunit (SSU)... 0.03 OrthoFinder output from all 47 species
Ceric.10G003600.1 Ceric.10G003600 component *(eS25) of small ribosomal-subunit (SSU)... 0.03 OrthoFinder output from all 47 species
Cpa|evm.model.tig00000037.5 No alias 40S ribosomal protein S25-4 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
Cre08.g382500 No alias Protein biosynthesis.cytosolic ribosome.small subunit... 0.04 OrthoFinder output from all 47 species
Dac_g25480 No alias component *(eS25) of small ribosomal-subunit (SSU)... 0.04 OrthoFinder output from all 47 species
Dcu_g23757 No alias component *(eS25) of small ribosomal-subunit (SSU)... 0.06 OrthoFinder output from all 47 species
Dcu_g29355 No alias component *(eS25) of small ribosomal-subunit (SSU)... 0.05 OrthoFinder output from all 47 species
Dcu_g35742 No alias component *(eS25) of small ribosomal-subunit (SSU)... 0.03 OrthoFinder output from all 47 species
GSVIVT01023806001 No alias Protein biosynthesis.cytosolic ribosome.small subunit... 0.04 OrthoFinder output from all 47 species
Gb_01693 No alias component RPS25 of SSU proteome 0.03 OrthoFinder output from all 47 species
Gb_29693 No alias component RPS25 of SSU proteome 0.04 OrthoFinder output from all 47 species
LOC_Os08g44480.1 LOC_Os08g44480 component RPS25 of SSU proteome 0.02 OrthoFinder output from all 47 species
LOC_Os09g39540.1 LOC_Os09g39540 component RPS25 of SSU proteome 0.02 OrthoFinder output from all 47 species
MA_10430279g0010 No alias component RPS25 of SSU proteome 0.02 OrthoFinder output from all 47 species
Mp4g06120.1 No alias component RPS25 of SSU proteome 0.04 OrthoFinder output from all 47 species
Msp_g10038 No alias component *(eS25) of small ribosomal-subunit (SSU)... 0.02 OrthoFinder output from all 47 species
Msp_g33012 No alias component *(eS25) of small ribosomal-subunit (SSU)... 0.02 OrthoFinder output from all 47 species
Pir_g08680 No alias component *(eS25) of small ribosomal-subunit (SSU)... 0.03 OrthoFinder output from all 47 species
Pp3c14_13580V3.1 Pp3c14_13580 Ribosomal protein S25 family protein 0.02 OrthoFinder output from all 47 species
Pp3c17_4670V3.1 Pp3c17_4670 Ribosomal protein S25 family protein 0.03 OrthoFinder output from all 47 species
Pp3c1_25330V3.1 Pp3c1_25330 Ribosomal protein S25 family protein 0.01 OrthoFinder output from all 47 species
Ppi_g23162 No alias component *(eS25) of small ribosomal-subunit (SSU)... 0.03 OrthoFinder output from all 47 species
Ppi_g25745 No alias component *(eS25) of small ribosomal-subunit (SSU)... 0.03 OrthoFinder output from all 47 species
Sam_g20177 No alias component *(eS25) of small ribosomal-subunit (SSU)... 0.03 OrthoFinder output from all 47 species
Sam_g30236 No alias component *(eS25) of small ribosomal-subunit (SSU)... 0.05 OrthoFinder output from all 47 species
Sam_g40302 No alias component *(eS25) of small ribosomal-subunit (SSU)... 0.04 OrthoFinder output from all 47 species
Smo172404 No alias Protein biosynthesis.cytosolic ribosome.small subunit... 0.02 OrthoFinder output from all 47 species
Spa_g36308 No alias component *(eS25) of small ribosomal-subunit (SSU)... 0.04 OrthoFinder output from all 47 species
Spa_g42651 No alias component *(eS25) of small ribosomal-subunit (SSU)... 0.03 OrthoFinder output from all 47 species
Zm00001e019589_P001 Zm00001e019589 component RPS25 of SSU proteome 0.03 OrthoFinder output from all 47 species
Zm00001e022058_P001 Zm00001e022058 component RPS25 of SSU proteome 0.02 OrthoFinder output from all 47 species
Zm00001e028930_P001 Zm00001e028930 component RPS25 of SSU proteome 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000413 protein peptidyl-prolyl isomerization IEP HCCA
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003735 structural constituent of ribosome IEP HCCA
MF GO:0003755 peptidyl-prolyl cis-trans isomerase activity IEP HCCA
MF GO:0004129 cytochrome-c oxidase activity IEP HCCA
MF GO:0004857 enzyme inhibitor activity IEP HCCA
MF GO:0004866 endopeptidase inhibitor activity IEP HCCA
MF GO:0004869 cysteine-type endopeptidase inhibitor activity IEP HCCA
MF GO:0005198 structural molecule activity IEP HCCA
CC GO:0005575 cellular_component IEP HCCA
CC GO:0005840 ribosome IEP HCCA
BP GO:0006412 translation IEP HCCA
BP GO:0006518 peptide metabolic process IEP HCCA
BP GO:0006807 nitrogen compound metabolic process IEP HCCA
BP GO:0008150 biological_process IEP HCCA
BP GO:0008152 metabolic process IEP HCCA
MF GO:0009055 electron transfer activity IEP HCCA
BP GO:0009058 biosynthetic process IEP HCCA
BP GO:0009059 macromolecule biosynthetic process IEP HCCA
BP GO:0009060 aerobic respiration IEP HCCA
BP GO:0009987 cellular process IEP HCCA
MF GO:0015399 primary active transmembrane transporter activity IEP HCCA
MF GO:0015453 oxidoreduction-driven active transmembrane transporter activity IEP HCCA
BP GO:0015980 energy derivation by oxidation of organic compounds IEP HCCA
MF GO:0016491 oxidoreductase activity IEP HCCA
MF GO:0016675 oxidoreductase activity, acting on a heme group of donors IEP HCCA
MF GO:0016859 cis-trans isomerase activity IEP HCCA
BP GO:0018193 peptidyl-amino acid modification IEP HCCA
BP GO:0018208 peptidyl-proline modification IEP HCCA
BP GO:0019538 protein metabolic process IEP HCCA
MF GO:0022853 active monoatomic ion transmembrane transporter activity IEP HCCA
MF GO:0030234 enzyme regulator activity IEP HCCA
MF GO:0030414 peptidase inhibitor activity IEP HCCA
BP GO:0034641 cellular nitrogen compound metabolic process IEP HCCA
BP GO:0034645 cellular macromolecule biosynthetic process IEP HCCA
BP GO:0043043 peptide biosynthetic process IEP HCCA
BP GO:0043170 macromolecule metabolic process IEP HCCA
CC GO:0043226 organelle IEP HCCA
CC GO:0043228 non-membrane-bounded organelle IEP HCCA
CC GO:0043229 intracellular organelle IEP HCCA
CC GO:0043232 intracellular non-membrane-bounded organelle IEP HCCA
BP GO:0043603 amide metabolic process IEP HCCA
BP GO:0043604 amide biosynthetic process IEP HCCA
BP GO:0044237 cellular metabolic process IEP HCCA
BP GO:0044238 primary metabolic process IEP HCCA
BP GO:0044249 cellular biosynthetic process IEP HCCA
BP GO:0044260 cellular macromolecule metabolic process IEP HCCA
BP GO:0044271 cellular nitrogen compound biosynthetic process IEP HCCA
BP GO:0045333 cellular respiration IEP HCCA
MF GO:0061134 peptidase regulator activity IEP HCCA
MF GO:0061135 endopeptidase regulator activity IEP HCCA
BP GO:0071704 organic substance metabolic process IEP HCCA
CC GO:0110165 cellular anatomical entity IEP HCCA
MF GO:0140678 molecular function inhibitor activity IEP HCCA
BP GO:1901564 organonitrogen compound metabolic process IEP HCCA
BP GO:1901566 organonitrogen compound biosynthetic process IEP HCCA
BP GO:1901576 organic substance biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR004977 Ribosomal_S25 8 106
No external refs found!