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  5. Sam_g31072

Sam_g31072


Description : not classified & original description: none


Gene families : OG0005882 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0005882_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sam_g31072
Cluster HCCA: Cluster_69

Target Alias Description ECC score Gene Family Method Actions
Ala_g23123 ACAM-6, CAM6 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dac_g38120 ACAM-2, CAM5 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g27240 CAM3, acam-3 not classified & original description: none 0.06 OrthoFinder output from all 47 species
Dcu_g50511 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g50949 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g51830 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Sam_g01661 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Sam_g15157 No alias calcium sensor *(CML) & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g15688 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g25760 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g27609 No alias calcium sensor *(CML) & original description: none 0.06 OrthoFinder output from all 47 species
Sam_g31485 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g44139 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005509 calcium ion binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEP HCCA
MF GO:0003779 actin binding IEP HCCA
MF GO:0005198 structural molecule activity IEP HCCA
CC GO:0005840 ribosome IEP HCCA
BP GO:0006412 translation IEP HCCA
BP GO:0006518 peptide metabolic process IEP HCCA
MF GO:0008092 cytoskeletal protein binding IEP HCCA
BP GO:0009059 macromolecule biosynthetic process IEP HCCA
MF GO:0030246 carbohydrate binding IEP HCCA
BP GO:0034645 cellular macromolecule biosynthetic process IEP HCCA
BP GO:0043043 peptide biosynthetic process IEP HCCA
CC GO:0043226 organelle IEP HCCA
CC GO:0043228 non-membrane-bounded organelle IEP HCCA
CC GO:0043229 intracellular organelle IEP HCCA
CC GO:0043232 intracellular non-membrane-bounded organelle IEP HCCA
BP GO:0043603 amide metabolic process IEP HCCA
BP GO:0043604 amide biosynthetic process IEP HCCA
BP GO:0044271 cellular nitrogen compound biosynthetic process IEP HCCA
BP GO:1901566 organonitrogen compound biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR002048 EF_hand_dom 122 183
No external refs found!