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Aliases : COB
Description : regulatory protein *(COB) of cellulose-hemicellulose network assembly & original description: none
Gene families : OG0000498 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000498_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: Lfl_g28447 | |
| Cluster | HCCA: Cluster_103 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AT1G09790 | COBL6 | COBRA-like protein 6 precursor | 0.05 | OrthoFinder output from all 47 species | |
| Adi_g082871 | COB | regulatory protein *(COB) of cellulose-hemicellulose... | 0.03 | OrthoFinder output from all 47 species | |
| Aev_g02340 | COB | regulatory protein *(COB) of cellulose-hemicellulose... | 0.03 | OrthoFinder output from all 47 species | |
| Als_g00864 | No alias | regulatory protein *(COB) of cellulose-hemicellulose... | 0.03 | OrthoFinder output from all 47 species | |
| Als_g15085 | COBL2 | regulatory protein *(COB) of cellulose-hemicellulose... | 0.02 | OrthoFinder output from all 47 species | |
| Aob_g14283 | COB | regulatory protein *(COB) of cellulose-hemicellulose... | 0.05 | OrthoFinder output from all 47 species | |
| Cba_g13589 | SEB1, COBL7, ATSEB1 | regulatory protein *(COB) of cellulose-hemicellulose... | 0.03 | OrthoFinder output from all 47 species | |
| Ceric.25G025100.1 | COBL2, Ceric.25G025100 | regulatory protein *(COB) of cellulose-hemicellulose... | 0.03 | OrthoFinder output from all 47 species | |
| Dac_g15805 | COBL1 | regulatory protein *(COB) of cellulose-hemicellulose... | 0.03 | OrthoFinder output from all 47 species | |
| GSVIVT01008129001 | IRX6, COBL4 | Cell wall.cellulose.synthesis.cellulose microfibrils and... | 0.02 | OrthoFinder output from all 47 species | |
| GSVIVT01012641001 | COBL10 | Cell wall.cellulose.synthesis.cellulose microfibrils and... | 0.02 | OrthoFinder output from all 47 species | |
| GSVIVT01036566001 | COB | Cell wall.cellulose.synthesis.cellulose microfibrils and... | 0.03 | OrthoFinder output from all 47 species | |
| Gb_36720 | COB | COB cellulose microfibrils and hemicellulose interaction protein | 0.04 | OrthoFinder output from all 47 species | |
| LOC_Os03g54750.1 | COB, LOC_Os03g54750 | COB cellulose microfibrils and hemicellulose interaction protein | 0.02 | OrthoFinder output from all 47 species | |
| LOC_Os05g32110.1 | COB, LOC_Os05g32110 | COB cellulose microfibrils and hemicellulose interaction protein | 0.05 | OrthoFinder output from all 47 species | |
| MA_106654g0010 | COB | COB cellulose microfibrils and hemicellulose interaction protein | 0.03 | OrthoFinder output from all 47 species | |
| MA_4056g0010 | COB | COB cellulose microfibrils and hemicellulose interaction protein | 0.02 | OrthoFinder output from all 47 species | |
| Mp1g17600.1 | COBL11 | COB cellulose microfibrils and hemicellulose interaction protein | 0.03 | OrthoFinder output from all 47 species | |
| Mp1g18890.1 | COBL10 | COB cellulose microfibrils and hemicellulose interaction protein | 0.02 | OrthoFinder output from all 47 species | |
| Mp7g06600.1 | COBL1 | COB cellulose microfibrils and hemicellulose interaction protein | 0.02 | OrthoFinder output from all 47 species | |
| Msp_g26241 | COB | regulatory protein *(COB) of cellulose-hemicellulose... | 0.03 | OrthoFinder output from all 47 species | |
| Nbi_g08845 | COBL1 | regulatory protein *(COB) of cellulose-hemicellulose... | 0.03 | OrthoFinder output from all 47 species | |
| Smo126731 | SEB1, COBL7, ATSEB1 | Cell wall.cellulose.synthesis.cellulose microfibrils and... | 0.03 | OrthoFinder output from all 47 species | |
| Smo271954 | COBL1 | Cell wall.cellulose.synthesis.cellulose microfibrils and... | 0.03 | OrthoFinder output from all 47 species | |
| Solyc02g080240.2.1 | COBL10, Solyc02g080240 | COBRA-like protein 10 OS=Arabidopsis thaliana... | 0.03 | OrthoFinder output from all 47 species | |
| Solyc02g089130.4.1 | IRX6, COBL4,... | COB cellulose microfibrils and hemicellulose interaction protein | 0.02 | OrthoFinder output from all 47 species | |
| Spa_g13676 | COBL1 | regulatory protein *(COB) of cellulose-hemicellulose... | 0.03 | OrthoFinder output from all 47 species | |
| Tin_g29852 | COBL2 | regulatory protein *(COB) of cellulose-hemicellulose... | 0.03 | OrthoFinder output from all 47 species | |
| Zm00001e012022_P001 | COB, Zm00001e012022 | COB cellulose microfibrils and hemicellulose interaction protein | 0.03 | OrthoFinder output from all 47 species | |
| Zm00001e035505_P001 | IRX6, COBL4,... | COB cellulose microfibrils and hemicellulose interaction protein | 0.02 | OrthoFinder output from all 47 species | |
| Zm00001e038043_P001 | IRX6, COBL4,... | COB cellulose microfibrils and hemicellulose interaction protein | 0.03 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| BP | GO:0007165 | signal transduction | IEP | HCCA |
| MF | GO:0009055 | electron transfer activity | IEP | HCCA |
| MF | GO:0015399 | primary active transmembrane transporter activity | IEP | HCCA |
| MF | GO:0022804 | active transmembrane transporter activity | IEP | HCCA |
| BP | GO:0035556 | intracellular signal transduction | IEP | HCCA |
| MF | GO:0042626 | ATPase-coupled transmembrane transporter activity | IEP | HCCA |
| MF | GO:0140359 | ABC-type transporter activity | IEP | HCCA |
No InterPro domains available for this sequence
| No external refs found! |