Sam_g30486


Description : not classified & original description: none


Gene families : OG0001623 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001623_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sam_g30486
Cluster HCCA: Cluster_19

Target Alias Description ECC score Gene Family Method Actions
Adi_g120109 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g41205 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g16943 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g14434 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Nbi_g16275 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g22924 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Nbi_g33018 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g08789 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ppi_g27416 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Sam_g07623 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Sam_g31527 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Sam_g31609 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Sam_g42953 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Sam_g43695 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Sam_g44881 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Sam_g49348 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
BP GO:0000413 protein peptidyl-prolyl isomerization IEP HCCA
MF GO:0003735 structural constituent of ribosome IEP HCCA
MF GO:0003755 peptidyl-prolyl cis-trans isomerase activity IEP HCCA
MF GO:0005198 structural molecule activity IEP HCCA
CC GO:0005840 ribosome IEP HCCA
BP GO:0006412 translation IEP HCCA
BP GO:0006518 peptide metabolic process IEP HCCA
BP GO:0006807 nitrogen compound metabolic process IEP HCCA
BP GO:0009059 macromolecule biosynthetic process IEP HCCA
MF GO:0016701 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen IEP HCCA
MF GO:0016702 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen IEP HCCA
MF GO:0016853 isomerase activity IEP HCCA
MF GO:0016859 cis-trans isomerase activity IEP HCCA
BP GO:0018193 peptidyl-amino acid modification IEP HCCA
BP GO:0018208 peptidyl-proline modification IEP HCCA
BP GO:0019538 protein metabolic process IEP HCCA
BP GO:0034645 cellular macromolecule biosynthetic process IEP HCCA
BP GO:0043043 peptide biosynthetic process IEP HCCA
BP GO:0043170 macromolecule metabolic process IEP HCCA
CC GO:0043226 organelle IEP HCCA
CC GO:0043228 non-membrane-bounded organelle IEP HCCA
CC GO:0043229 intracellular organelle IEP HCCA
CC GO:0043232 intracellular non-membrane-bounded organelle IEP HCCA
BP GO:0043603 amide metabolic process IEP HCCA
BP GO:0043604 amide biosynthetic process IEP HCCA
BP GO:0044238 primary metabolic process IEP HCCA
BP GO:0044249 cellular biosynthetic process IEP HCCA
BP GO:0044260 cellular macromolecule metabolic process IEP HCCA
BP GO:0044271 cellular nitrogen compound biosynthetic process IEP HCCA
MF GO:0051213 dioxygenase activity IEP HCCA
BP GO:1901564 organonitrogen compound metabolic process IEP HCCA
BP GO:1901566 organonitrogen compound biosynthetic process IEP HCCA
BP GO:1901576 organic substance biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR000566 Lipocln_cytosolic_FA-bd_dom 6 116
No external refs found!