Sam_g30283


Description : LHC-related protein *(OHP1) & original description: none


Gene families : OG0006730 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0006730_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sam_g30283

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00012p00252840 evm_27.TU.AmTr_v1... Photosynthesis.photophosphorylation.photosystem... 0.05 OrthoFinder output from all 47 species
AT5G02120 OHP one helix protein 0.03 OrthoFinder output from all 47 species
Adi_g015882 OHP LHC-related protein *(OHP1) & original description: none 0.02 OrthoFinder output from all 47 species
Als_g54203 OHP LHC-related protein *(OHP1) & original description: none 0.05 OrthoFinder output from all 47 species
Aop_g48648 OHP LHC-related protein *(OHP1) & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.35G031400.1 OHP, Ceric.35G031400 LHC-related protein *(OHP1) & original description:... 0.05 OrthoFinder output from all 47 species
Cre02.g109950 No alias Photosynthesis.photophosphorylation.photosystem... 0.04 OrthoFinder output from all 47 species
Dac_g27459 OHP LHC-related protein *(OHP1) & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g00111 OHP LHC-related protein *(OHP1) & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g02075 OHP LHC-related protein *(OHP1) & original description: none 0.03 OrthoFinder output from all 47 species
LOC_Os05g22730.1 OHP, LOC_Os05g22730 OHP1 LHC-related protein 0.04 OrthoFinder output from all 47 species
Len_g29330 OHP LHC-related protein *(OHP1) & original description: none 0.05 OrthoFinder output from all 47 species
Lfl_g24229 No alias LHC-related protein *(OHP1) & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g08209 OHP LHC-related protein *(OHP1) & original description: none 0.05 OrthoFinder output from all 47 species
Pir_g60607 OHP LHC-related protein *(OHP1) & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g10723 OHP LHC-related protein *(OHP1) & original description: none 0.05 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
CC GO:0005575 cellular_component IEP HCCA
CC GO:0005840 ribosome IEP HCCA
MF GO:0019843 rRNA binding IEP HCCA
CC GO:0043226 organelle IEP HCCA
CC GO:0043228 non-membrane-bounded organelle IEP HCCA
CC GO:0043229 intracellular organelle IEP HCCA
CC GO:0043232 intracellular non-membrane-bounded organelle IEP HCCA
CC GO:0110165 cellular anatomical entity IEP HCCA

No InterPro domains available for this sequence

No external refs found!