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  5. Sam_g30264

Sam_g30264


Description : gamma-aminobutyric acid transporter *(GAT) & original description: none


Gene families : OG0000375 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000375_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sam_g30264
Cluster HCCA: Cluster_18

Target Alias Description ECC score Gene Family Method Actions
AT5G41800 No alias Transmembrane amino acid transporter family protein 0.02 OrthoFinder output from all 47 species
Adi_g003251 No alias gamma-aminobutyric acid transporter *(GAT) & original... 0.03 OrthoFinder output from all 47 species
Adi_g049697 No alias gamma-aminobutyric acid transporter *(GAT) & original... 0.03 OrthoFinder output from all 47 species
Aspi01Gene50736.t1 Aspi01Gene50736 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Azfi_s0042.g026938 No alias not classified & original description: CDS=503-2446 0.03 OrthoFinder output from all 47 species
Ceric.23G048400.1 Ceric.23G048400 gamma-aminobutyric acid transporter *(GAT) & original... 0.04 OrthoFinder output from all 47 species
Ehy_g01261 No alias gamma-aminobutyric acid transporter *(GAT) & original... 0.02 OrthoFinder output from all 47 species
GSVIVT01031408001 No alias Solute transport.carrier-mediated transport.APC... 0.05 OrthoFinder output from all 47 species
GSVIVT01034728001 No alias Solute transport.carrier-mediated transport.APC... 0.02 OrthoFinder output from all 47 species
Gb_39426 No alias gamma-aminobutyric acid transporter (GAT) 0.02 OrthoFinder output from all 47 species
LOC_Os01g43320.1 LOC_Os01g43320 gamma-aminobutyric acid transporter (GAT) 0.05 OrthoFinder output from all 47 species
Len_g20418 No alias gamma-aminobutyric acid transporter *(GAT) & original... 0.02 OrthoFinder output from all 47 species
MA_10429687g0010 ATPROT1, PROT1 proline transporter (ProT) 0.03 OrthoFinder output from all 47 species
MA_179388g0010 AAP8, ATAAP8 gamma-aminobutyric acid transporter (GAT) 0.02 OrthoFinder output from all 47 species
Sam_g24521 No alias gamma-aminobutyric acid transporter *(GAT) & original... 0.03 OrthoFinder output from all 47 species
Solyc11g066800.2.1 Solyc11g066800 gamma-aminobutyric acid transporter (GAT) 0.02 OrthoFinder output from all 47 species
Spa_g18757 No alias gamma-aminobutyric acid transporter *(GAT) & original... 0.02 OrthoFinder output from all 47 species
Spa_g20862 No alias gamma-aminobutyric acid transporter *(GAT) & original... 0.02 OrthoFinder output from all 47 species
Spa_g40762 No alias gamma-aminobutyric acid transporter *(GAT) & original... 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004096 catalase activity IEP HCCA
MF GO:0004601 peroxidase activity IEP HCCA
MF GO:0016209 antioxidant activity IEP HCCA
MF GO:0016684 oxidoreductase activity, acting on peroxide as acceptor IEP HCCA
MF GO:0020037 heme binding IEP HCCA
MF GO:0046906 tetrapyrrole binding IEP HCCA
InterPro domains Description Start Stop
IPR013057 AA_transpt_TM 34 431
No external refs found!