- Species
- Tools
- Expression Profiles
- Compare profiles
- Create heatmap
- Export expression levels
- Expression Specificity
- Compare specificities
- Find specific profiles
- Co-expression Networks
- Create custom network
- Find enriched clusters
- Search
Description : NDX-type transcription factor & original description: none
Gene families : OG0003424 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003424_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: Sam_g30227 | |
| Cluster | HCCA: Cluster_181 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AMTR_s00025p00031700 | evm_27.TU.AmTr_v1... | RNA biosynthesis.transcriptional activation.HB... | 0.02 | OrthoFinder output from all 47 species | |
| Ala_g02709 | No alias | NDX-type transcription factor & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Als_g22927 | No alias | NDX-type transcription factor & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Aop_g13614 | No alias | NDX-type transcription factor & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Aspi01Gene71080.t1 | Aspi01Gene71080 | NDX-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Azfi_s0003.g007857 | No alias | not classified & original description: CDS=227-2413 | 0.03 | OrthoFinder output from all 47 species | |
| Cba_g22370 | No alias | NDX-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ceric.1Z061200.1 | Ceric.1Z061200 | not classified & original description: pacid=50604630... | 0.02 | OrthoFinder output from all 47 species | |
| Dcu_g07774 | No alias | NDX-type transcription factor & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Dde_g08164 | No alias | NDX-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ehy_g14457 | No alias | NDX-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| GSVIVT01011024001 | No alias | RNA biosynthesis.transcriptional activation.HB... | 0.04 | OrthoFinder output from all 47 species | |
| LOC_Os05g09630.1 | LOC_Os05g09630 | transcription factor (NDX) | 0.02 | OrthoFinder output from all 47 species | |
| MA_10429256g0010 | No alias | no hits & (original description: none) | 0.01 | OrthoFinder output from all 47 species | |
| MA_10429256g0020 | No alias | transcription factor (NDX) | 0.02 | OrthoFinder output from all 47 species | |
| Mp1g16560.1 | No alias | transcription factor (NDX) | 0.03 | OrthoFinder output from all 47 species | |
| Ppi_g29462 | No alias | NDX-type transcription factor & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Solyc09g074330.3.1 | Solyc09g074330 | transcription factor (NDX) | 0.03 | OrthoFinder output from all 47 species | |
| Spa_g07603 | No alias | NDX-type transcription factor & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Zm00001e011342_P004 | Zm00001e011342 | transcription factor (NDX) | 0.04 | OrthoFinder output from all 47 species | |
| Zm00001e021086_P004 | Zm00001e021086 | transcription factor (NDX) | 0.05 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0000166 | nucleotide binding | IEP | HCCA |
| MF | GO:0003676 | nucleic acid binding | IEP | HCCA |
| MF | GO:0003723 | RNA binding | IEP | HCCA |
| MF | GO:0003873 | 6-phosphofructo-2-kinase activity | IEP | HCCA |
| MF | GO:0005488 | binding | IEP | HCCA |
| MF | GO:0005524 | ATP binding | IEP | HCCA |
| CC | GO:0005667 | transcription regulator complex | IEP | HCCA |
| CC | GO:0005669 | transcription factor TFIID complex | IEP | HCCA |
| BP | GO:0005996 | monosaccharide metabolic process | IEP | HCCA |
| BP | GO:0006000 | fructose metabolic process | IEP | HCCA |
| BP | GO:0006352 | DNA-templated transcription initiation | IEP | HCCA |
| MF | GO:0008443 | phosphofructokinase activity | IEP | HCCA |
| BP | GO:0009966 | regulation of signal transduction | IEP | HCCA |
| BP | GO:0010646 | regulation of cell communication | IEP | HCCA |
| MF | GO:0017076 | purine nucleotide binding | IEP | HCCA |
| MF | GO:0019200 | carbohydrate kinase activity | IEP | HCCA |
| BP | GO:0019318 | hexose metabolic process | IEP | HCCA |
| BP | GO:0023051 | regulation of signaling | IEP | HCCA |
| MF | GO:0030554 | adenyl nucleotide binding | IEP | HCCA |
| MF | GO:0032553 | ribonucleotide binding | IEP | HCCA |
| MF | GO:0032555 | purine ribonucleotide binding | IEP | HCCA |
| MF | GO:0032559 | adenyl ribonucleotide binding | IEP | HCCA |
| MF | GO:0035639 | purine ribonucleoside triphosphate binding | IEP | HCCA |
| MF | GO:0036094 | small molecule binding | IEP | HCCA |
| MF | GO:0043167 | ion binding | IEP | HCCA |
| MF | GO:0043168 | anion binding | IEP | HCCA |
| BP | GO:0048583 | regulation of response to stimulus | IEP | HCCA |
| CC | GO:0090575 | RNA polymerase II transcription regulator complex | IEP | HCCA |
| MF | GO:0097159 | organic cyclic compound binding | IEP | HCCA |
| MF | GO:0097367 | carbohydrate derivative binding | IEP | HCCA |
| MF | GO:1901265 | nucleoside phosphate binding | IEP | HCCA |
| MF | GO:1901363 | heterocyclic compound binding | IEP | HCCA |
No InterPro domains available for this sequence
| No external refs found! |