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  5. Sam_g30222

Sam_g30222


Description : not classified & original description: none


Gene families : OG0000125 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000125_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sam_g30222

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00023p00152880 evm_27.TU.AmTr_v1... No description available 0.02 OrthoFinder output from all 47 species
AT3G47250 No alias Plant protein of unknown function (DUF247) 0.03 OrthoFinder output from all 47 species
AT3G50140 No alias Plant protein of unknown function (DUF247) 0.03 OrthoFinder output from all 47 species
AT3G50200 No alias Plant protein of unknown function (DUF247) 0.03 OrthoFinder output from all 47 species
Ala_g06779 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g47114 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g10768 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.08G043000.1 Ceric.08G043000 not classified & original description: pacid=50637921... 0.06 OrthoFinder output from all 47 species
Ceric.11G038500.1 Ceric.11G038500 not classified & original description: pacid=50595115... 0.03 OrthoFinder output from all 47 species
Dac_g07573 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g42582 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g02076 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Solyc04g008910.3.1 Solyc04g008910 UPF0481 protein At3g47200 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0005543 phospholipid binding IEP HCCA
MF GO:0008270 zinc ion binding IEP HCCA
MF GO:0008289 lipid binding IEP HCCA
MF GO:0032182 ubiquitin-like protein binding IEP HCCA
MF GO:0035091 phosphatidylinositol binding IEP HCCA
MF GO:0043130 ubiquitin binding IEP HCCA
InterPro domains Description Start Stop
IPR004158 DUF247_pln 104 494
No external refs found!