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  5. Sam_g30214

Sam_g30214


Description : not classified & original description: none


Gene families : OG0000058 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sam_g30214

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00022p00208630 ATLOX2, LOX2,... Phytohormones.jasmonic acid.synthesis.13-lipoxygenase 0.04 OrthoFinder output from all 47 species
Ala_g03704 LOX4 EC_1.13 oxidoreductase acting on single donor with... 0.03 OrthoFinder output from all 47 species
Ala_g22721 LOX4 EC_1.13 oxidoreductase acting on single donor with... 0.04 OrthoFinder output from all 47 species
Cba_g15482 ATLOX1, LOX1 EC_1.13 oxidoreductase acting on single donor with... 0.03 OrthoFinder output from all 47 species
Ceric.07G041700.1 ATLOX1, LOX1,... EC_1.13 oxidoreductase acting on single donor with... 0.03 OrthoFinder output from all 47 species
Dac_g22749 ATLOX1, LOX1 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dac_g31495 ATLOX1, LOX1 EC_1.13 oxidoreductase acting on single donor with... 0.02 OrthoFinder output from all 47 species
LOC_Os03g49380.1 ATLOX1, LOX1,... Probable linoleate 9S-lipoxygenase 4 OS=Oryza sativa... 0.03 OrthoFinder output from all 47 species
Lfl_g21322 ATLOX1, LOX1 EC_1.13 oxidoreductase acting on single donor with... 0.02 OrthoFinder output from all 47 species
Nbi_g13579 ATLOX1, LOX1 EC_1.13 oxidoreductase acting on single donor with... 0.03 OrthoFinder output from all 47 species
Ppi_g52858 LOX5 EC_1.13 oxidoreductase acting on single donor with... 0.04 OrthoFinder output from all 47 species
Tin_g22963 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0016702 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen IEA Interproscan
MF GO:0046872 metal ion binding IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0005984 disaccharide metabolic process IEP HCCA
BP GO:0005991 trehalose metabolic process IEP HCCA
BP GO:0005992 trehalose biosynthetic process IEP HCCA
BP GO:0009311 oligosaccharide metabolic process IEP HCCA
BP GO:0009312 oligosaccharide biosynthetic process IEP HCCA
BP GO:0016051 carbohydrate biosynthetic process IEP HCCA
MF GO:0016887 ATP hydrolysis activity IEP HCCA
BP GO:0034637 cellular carbohydrate biosynthetic process IEP HCCA
BP GO:0044262 cellular carbohydrate metabolic process IEP HCCA
BP GO:0046351 disaccharide biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR001024 PLAT/LH2_dom 32 93
IPR013819 LipOase_C 107 142
No external refs found!