Description : associated component *(AFR) of histone deacetylase machineries & original description: none
Gene families : OG0001072 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001072_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | HRR: Sam_g30194 | |
Cluster | HCCA: Cluster_155 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
AT1G19330 | No alias | unknown protein; BEST Arabidopsis thaliana protein match... | 0.02 | OrthoFinder output from all 47 species | |
Ala_g01904 | No alias | associated component *(AFR) of histone deacetylase... | 0.04 | OrthoFinder output from all 47 species | |
Als_g09801 | No alias | associated component *(AFR) of histone deacetylase... | 0.03 | OrthoFinder output from all 47 species | |
Als_g23594 | No alias | associated component *(AFR) of histone deacetylase... | 0.02 | OrthoFinder output from all 47 species | |
Cba_g50138 | No alias | associated component *(AFR) of histone deacetylase... | 0.02 | OrthoFinder output from all 47 species | |
Ceric.07G066600.1 | Ceric.07G066600 | associated component *(AFR) of histone deacetylase... | 0.04 | OrthoFinder output from all 47 species | |
Ceric.28G016000.1 | Ceric.28G016000 | associated component *(AFR) of histone deacetylase... | 0.03 | OrthoFinder output from all 47 species | |
Len_g14311 | No alias | associated component *(AFR) of histone deacetylase... | 0.02 | OrthoFinder output from all 47 species | |
Nbi_g00911 | No alias | associated component *(AFR) of histone deacetylase... | 0.02 | OrthoFinder output from all 47 species | |
Sacu_v1.1_s0019.g007685 | No alias | associated component *(AFR) of histone deacetylase... | 0.02 | OrthoFinder output from all 47 species | |
Sam_g20047 | No alias | associated component *(AFR) of histone deacetylase... | 0.04 | OrthoFinder output from all 47 species | |
Spa_g18677 | No alias | associated component *(AFR) of histone deacetylase... | 0.03 | OrthoFinder output from all 47 species |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0005515 | protein binding | IEA | Interproscan |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
CC | GO:0000139 | Golgi membrane | IEP | HCCA |
MF | GO:0003774 | cytoskeletal motor activity | IEP | HCCA |
MF | GO:0003777 | microtubule motor activity | IEP | HCCA |
MF | GO:0005338 | nucleotide-sugar transmembrane transporter activity | IEP | HCCA |
BP | GO:0006457 | protein folding | IEP | HCCA |
BP | GO:0007017 | microtubule-based process | IEP | HCCA |
BP | GO:0007018 | microtubule-based movement | IEP | HCCA |
MF | GO:0008017 | microtubule binding | IEP | HCCA |
MF | GO:0008430 | selenium binding | IEP | HCCA |
MF | GO:0015165 | pyrimidine nucleotide-sugar transmembrane transporter activity | IEP | HCCA |
MF | GO:0015631 | tubulin binding | IEP | HCCA |
BP | GO:0015780 | nucleotide-sugar transmembrane transport | IEP | HCCA |
BP | GO:0015931 | nucleobase-containing compound transport | IEP | HCCA |
MF | GO:0015932 | nucleobase-containing compound transmembrane transporter activity | IEP | HCCA |
CC | GO:0016272 | prefoldin complex | IEP | HCCA |
CC | GO:0031090 | organelle membrane | IEP | HCCA |
MF | GO:0051082 | unfolded protein binding | IEP | HCCA |
BP | GO:0090481 | pyrimidine nucleotide-sugar transmembrane transport | IEP | HCCA |
CC | GO:0098588 | bounding membrane of organelle | IEP | HCCA |
BP | GO:1901264 | carbohydrate derivative transport | IEP | HCCA |
MF | GO:1901505 | carbohydrate derivative transmembrane transporter activity | IEP | HCCA |
InterPro domains | Description | Start | Stop |
---|---|---|---|
IPR025718 | SAP30_Sin3-bd | 155 | 208 |
No external refs found! |