Sam_g30175


Description : not classified & original description: none


Gene families : OG0005201 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0005201_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sam_g30175
Cluster HCCA: Cluster_141

Target Alias Description ECC score Gene Family Method Actions
Adi_g059274 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
LOC_Os02g53270.1 LOC_Os02g53270 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Len_g47379 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Nbi_g18592 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g11400 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Solyc03g098160.3.1 Solyc03g098160 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Zm00001e015998_P001 Zm00001e015998 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003743 translation initiation factor activity IEP HCCA
MF GO:0004674 protein serine/threonine kinase activity IEP HCCA
MF GO:0004721 phosphoprotein phosphatase activity IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005515 protein binding IEP HCCA
BP GO:0006413 translational initiation IEP HCCA
MF GO:0008138 protein tyrosine/serine/threonine phosphatase activity IEP HCCA
BP GO:0016311 dephosphorylation IEP HCCA
MF GO:0016791 phosphatase activity IEP HCCA
MF GO:0019842 vitamin binding IEP HCCA
MF GO:0030170 pyridoxal phosphate binding IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
MF GO:0042393 histone binding IEP HCCA
MF GO:0042578 phosphoric ester hydrolase activity IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0043168 anion binding IEP HCCA
MF GO:0070279 vitamin B6 binding IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
InterPro domains Description Start Stop
IPR013633 NRDE-2 283 679
No external refs found!