Sam_g30136

Description : subfamily ABCG transporter & original description: none

Gene families : OG0001702 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001702_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Sam_g30136
Cluster	HCCA: Cluster_4

Target	Alias	Description	ECC score	Gene Family Method
Aob_g13432	No alias	subfamily ABCG transporter & original description: none	0.02	OrthoFinder output from all 47 species
Azfi_s0075.g037686	No alias	subfamily ABCG transporter & original description: CDS=355-3330	0.04	OrthoFinder output from all 47 species
Azfi_s0380.g067358	No alias	subfamily ABCG transporter & original description: CDS=43-3537	0.03	OrthoFinder output from all 47 species
LOC_Os06g51460.1	LOC_Os06g51460	subfamily ABCG transporter	0.02	OrthoFinder output from all 47 species
Lfl_g07524	ATNAP12, NAP12	not classified & original description: none	0.02	OrthoFinder output from all 47 species
MA_8900862g0010	No alias	subfamily ABCG transporter	0.02	OrthoFinder output from all 47 species
Msp_g25783	No alias	subfamily ABCG transporter & original description: none	0.03	OrthoFinder output from all 47 species
Ore_g19705	No alias	subfamily ABCG transporter & original description: none	0.02	OrthoFinder output from all 47 species
Ppi_g09024	No alias	subfamily ABCG transporter & original description: none	0.02	OrthoFinder output from all 47 species
Tin_g02193	No alias	subfamily ABCG transporter & original description: none	0.03	OrthoFinder output from all 47 species
Zm00001e004692_P001	Zm00001e004692	subfamily ABCG transporter	0.03	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005524	ATP binding	IEA	Interproscan
MF	GO:0017076	purine nucleotide binding	None	Extended
MF	GO:0030554	adenyl nucleotide binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032559	adenyl ribonucleotide binding	None	Extended
MF	GO:0035639	purine ribonucleoside triphosphate binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

Type	GO Term	Name	Evidence	Source
MF	GO:0003824	catalytic activity	IEP	HCCA
MF	GO:0004672	protein kinase activity	IEP	HCCA
BP	GO:0006468	protein phosphorylation	IEP	HCCA
BP	GO:0006793	phosphorus metabolic process	IEP	HCCA
BP	GO:0006796	phosphate-containing compound metabolic process	IEP	HCCA
BP	GO:0006807	nitrogen compound metabolic process	IEP	HCCA
MF	GO:0016301	kinase activity	IEP	HCCA
BP	GO:0016310	phosphorylation	IEP	HCCA
MF	GO:0016740	transferase activity	IEP	HCCA
MF	GO:0016772	transferase activity, transferring phosphorus-containing groups	IEP	HCCA
MF	GO:0016773	phosphotransferase activity, alcohol group as acceptor	IEP	HCCA
BP	GO:0019538	protein metabolic process	IEP	HCCA
BP	GO:0036211	protein modification process	IEP	HCCA
BP	GO:0043170	macromolecule metabolic process	IEP	HCCA
BP	GO:0043412	macromolecule modification	IEP	HCCA
BP	GO:0044237	cellular metabolic process	IEP	HCCA
BP	GO:0044238	primary metabolic process	IEP	HCCA
MF	GO:0140096	catalytic activity, acting on a protein	IEP	HCCA
BP	GO:1901564	organonitrogen compound metabolic process	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR043926	ABCG_dom	730	1138
IPR003439	ABC_transporter-like_ATP-bd	550	701

External Links

No external refs found!