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  5. Sam_g30130

Sam_g30130


Description : not classified & original description: none


Gene families : OG0000236 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000236_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sam_g30130
Cluster HCCA: Cluster_168

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00022p00048210 evm_27.TU.AmTr_v1... No description available 0.07 OrthoFinder output from all 47 species
AMTR_s00025p00226120 evm_27.TU.AmTr_v1... No description available 0.04 OrthoFinder output from all 47 species
AMTR_s00059p00172960 evm_27.TU.AmTr_v1... No description available 0.03 OrthoFinder output from all 47 species
AMTR_s00106p00150110 evm_27.TU.AmTr_v1... No description available 0.03 OrthoFinder output from all 47 species
AMTR_s00131p00055770 evm_27.TU.AmTr_v1... No description available 0.04 OrthoFinder output from all 47 species
AMTR_s00138p00069300 evm_27.TU.AmTr_v1... No description available 0.02 OrthoFinder output from all 47 species
AT2G23700 No alias Protein of unknown function, DUF547 0.03 OrthoFinder output from all 47 species
AT2G39690 No alias Protein of unknown function, DUF547 0.04 OrthoFinder output from all 47 species
AT3G13000 No alias Protein of unknown function, DUF547 0.04 OrthoFinder output from all 47 species
Adi_g015276 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g109110 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g13882 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g39947 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g13873 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g19268 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g25226 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g03826 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g10150 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g13551 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g16129 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g21022 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g21743 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aob_g21128 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g07461 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g08833 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g11275 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g11890 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene12605.t1 Aspi01Gene12605 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene32505.t1 Aspi01Gene32505 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene46206.t1 Aspi01Gene46206 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene66708.t1 Aspi01Gene66708 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0061.g034925 No alias not classified & original description: CDS=223-2187 0.02 OrthoFinder output from all 47 species
Azfi_s0064.g035514 No alias not classified & original description: CDS=742-2646 0.04 OrthoFinder output from all 47 species
Azfi_s0099.g044141 No alias not classified & original description: CDS=527-2509 0.02 OrthoFinder output from all 47 species
Cba_g03959 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g05260 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g22564 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g24608 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g34443 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g38369 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Cba_g58052 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Ceric.02G060000.1 Ceric.02G060000 not classified & original description: pacid=50584416... 0.06 OrthoFinder output from all 47 species
Ceric.05G072100.1 Ceric.05G072100 not classified & original description: pacid=50579173... 0.07 OrthoFinder output from all 47 species
Ceric.14G094300.1 Ceric.14G094300 not classified & original description: pacid=50633652... 0.03 OrthoFinder output from all 47 species
Ceric.19G019200.1 Ceric.19G019200 not classified & original description: pacid=50576159... 0.02 OrthoFinder output from all 47 species
Ceric.20G014100.1 Ceric.20G014100 not classified & original description: pacid=50566742... 0.05 OrthoFinder output from all 47 species
Dac_g13842 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g14778 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g38820 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g08174 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dcu_g39577 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g02735 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g04973 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ehy_g06906 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g07757 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01002634001 No alias No description available 0.02 OrthoFinder output from all 47 species
GSVIVT01002886001 No alias No description available 0.02 OrthoFinder output from all 47 species
GSVIVT01014994001 No alias No description available 0.02 OrthoFinder output from all 47 species
GSVIVT01025228001 No alias No description available 0.02 OrthoFinder output from all 47 species
GSVIVT01031903001 No alias No description available 0.03 OrthoFinder output from all 47 species
Gb_05643 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Gb_16429 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
LOC_Os01g05480.3 LOC_Os01g05480 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
LOC_Os02g05900.1 LOC_Os02g05900 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
LOC_Os03g13130.2 LOC_Os03g13130 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
LOC_Os03g64230.1 LOC_Os03g64230 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
LOC_Os08g37104.1 LOC_Os08g37104 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
LOC_Os10g41040.1 LOC_Os10g41040 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Len_g59225 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g05619 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Lfl_g27106 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g37222 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
MA_124933g0010 No alias no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
MA_90792g0010 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Mp1g27890.1 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Msp_g15458 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Msp_g21403 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g07704 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Nbi_g09324 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g45564 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g09452 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g10504 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g03170 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g03174 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g17419 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g62402 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Sacu_v1.1_s0001.g000442 No alias not classified & original description: CDS=698-2671 0.05 OrthoFinder output from all 47 species
Sacu_v1.1_s0041.g012632 No alias not classified & original description: CDS=726-2756 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0090.g018756 No alias not classified & original description: CDS=1-2328 0.06 OrthoFinder output from all 47 species
Sam_g09691 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Sam_g25536 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g35283 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Sam_g39625 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Smo407459 No alias No description available 0.02 OrthoFinder output from all 47 species
Solyc06g008560.2.1 Solyc06g008560 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Spa_g17295 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g51544 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g01164 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g13862 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Zm00001e000910_P003 Zm00001e000910 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Zm00001e003813_P004 Zm00001e003813 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Zm00001e005808_P001 Zm00001e005808 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Zm00001e009970_P005 Zm00001e009970 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Zm00001e011955_P001 Zm00001e011955 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Zm00001e013087_P001 Zm00001e013087 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Zm00001e021904_P001 Zm00001e021904 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Zm00001e032746_P001 Zm00001e032746 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Zm00001e034560_P003 Zm00001e034560 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP HCCA
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEP HCCA
MF GO:0004650 polygalacturonase activity IEP HCCA
MF GO:0005216 monoatomic ion channel activity IEP HCCA
BP GO:0005975 carbohydrate metabolic process IEP HCCA
MF GO:0015267 channel activity IEP HCCA
MF GO:0015276 ligand-gated monoatomic ion channel activity IEP HCCA
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP HCCA
MF GO:0022803 passive transmembrane transporter activity IEP HCCA
MF GO:0022834 ligand-gated channel activity IEP HCCA
MF GO:0022836 gated channel activity IEP HCCA
MF GO:0022839 monoatomic ion gated channel activity IEP HCCA
MF GO:0051287 NAD binding IEP HCCA
InterPro domains Description Start Stop
IPR025757 MIP1_Leuzipper 83 156
IPR006869 DUF547 408 542
No external refs found!