1. Home
  2. Species
  3. Salvinia molesta
  4. Sequence
  5. Sam_g30101

Sam_g30101


Description : not classified & original description: none


Gene families : OG0000592 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000592_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sam_g30101
Cluster HCCA: Cluster_123

Target Alias Description ECC score Gene Family Method Actions
AT5G42140 No alias Regulator of chromosome condensation (RCC1) family with... 0.02 OrthoFinder output from all 47 species
Aob_g32427 No alias regulatory protein *(RLD) of gravity sensing & original... 0.02 OrthoFinder output from all 47 species
Aspi01Gene54964.t1 Aspi01Gene54964 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g02089 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g15359 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dac_g11534 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01027823001 No alias PH, RCC1 and FYVE domains-containing protein 1... 0.01 OrthoFinder output from all 47 species
Gb_31523 No alias PH, RCC1 and FYVE domains-containing protein 1... 0.02 OrthoFinder output from all 47 species
LOC_Os04g58960.1 PRAF1, LOC_Os04g58960 PH, RCC1 and FYVE domains-containing protein 1... 0.02 OrthoFinder output from all 47 species
LOC_Os05g01610.1 PRAF1, LOC_Os05g01610 PH, RCC1 and FYVE domains-containing protein 1... 0.02 OrthoFinder output from all 47 species
MA_136157g0010 No alias PH, RCC1 and FYVE domains-containing protein 1... 0.02 OrthoFinder output from all 47 species
Msp_g09378 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g14558 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0132.g022141 No alias not classified & original description: CDS=662-3931 0.03 OrthoFinder output from all 47 species
Solyc03g116360.2.1 Solyc03g116360 PH, RCC1 and FYVE domains-containing protein 1... 0.02 OrthoFinder output from all 47 species
Zm00001e007139_P001 Zm00001e007139 PH, RCC1 and FYVE domains-containing protein 1... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0046872 metal ion binding IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEP HCCA
BP GO:0006066 alcohol metabolic process IEP HCCA
BP GO:0006486 protein glycosylation IEP HCCA
BP GO:0006720 isoprenoid metabolic process IEP HCCA
BP GO:0008299 isoprenoid biosynthetic process IEP HCCA
BP GO:0016311 dephosphorylation IEP HCCA
BP GO:0019751 polyol metabolic process IEP HCCA
BP GO:0043413 macromolecule glycosylation IEP HCCA
BP GO:0043647 inositol phosphate metabolic process IEP HCCA
BP GO:0044262 cellular carbohydrate metabolic process IEP HCCA
BP GO:0044282 small molecule catabolic process IEP HCCA
BP GO:0046164 alcohol catabolic process IEP HCCA
BP GO:0046174 polyol catabolic process IEP HCCA
BP GO:0046434 organophosphate catabolic process IEP HCCA
BP GO:0046838 phosphorylated carbohydrate dephosphorylation IEP HCCA
BP GO:0046855 inositol phosphate dephosphorylation IEP HCCA
MF GO:0051536 iron-sulfur cluster binding IEP HCCA
MF GO:0051540 metal cluster binding IEP HCCA
BP GO:0070085 glycosylation IEP HCCA
BP GO:0071545 inositol phosphate catabolic process IEP HCCA
BP GO:1901615 organic hydroxy compound metabolic process IEP HCCA
BP GO:1901616 organic hydroxy compound catabolic process IEP HCCA
InterPro domains Description Start Stop
IPR013591 Brevis_radix_dom 618 673
IPR000306 Znf_FYVE 181 247
IPR000408 Reg_chr_condens 130 177
IPR000408 Reg_chr_condens 76 125
IPR000408 Reg_chr_condens 24 73
IPR027988 BRX_N 432 464
No external refs found!