Sam_g30068


Description : not classified & original description: none


Gene families : OG0008910 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0008910_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sam_g30068
Cluster HCCA: Cluster_120

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00017p00160260 evm_27.TU.AmTr_v1... No description available 0.01 OrthoFinder output from all 47 species
AT1G44414 No alias unknown protein; Has 29 Blast hits to 29 proteins in 12... 0.02 OrthoFinder output from all 47 species
Aop_g02388 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.03G032700.1 Ceric.03G032700 not classified & original description: pacid=50571802... 0.05 OrthoFinder output from all 47 species
Ceric.31G008200.1 Ceric.31G008200 not classified & original description: pacid=50574964... 0.06 OrthoFinder output from all 47 species
Dac_g30726 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Len_g22035 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g12811 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Sacu_v1.1_s0271.g027015 No alias not classified & original description: CDS=1-363 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0886.g027817 No alias not classified & original description: CDS=1-363 0.04 OrthoFinder output from all 47 species
Solyc06g060300.1.1 Solyc06g060300 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Spa_g10339 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g14497 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0004601 peroxidase activity IEP HCCA
MF GO:0005507 copper ion binding IEP HCCA
BP GO:0006950 response to stress IEP HCCA
BP GO:0006979 response to oxidative stress IEP HCCA
CC GO:0016020 membrane IEP HCCA
MF GO:0016209 antioxidant activity IEP HCCA
MF GO:0016491 oxidoreductase activity IEP HCCA
MF GO:0016684 oxidoreductase activity, acting on peroxide as acceptor IEP HCCA
MF GO:0020037 heme binding IEP HCCA
MF GO:0035673 oligopeptide transmembrane transporter activity IEP HCCA
MF GO:0042887 amide transmembrane transporter activity IEP HCCA
MF GO:0046906 tetrapyrrole binding IEP HCCA
BP GO:0050896 response to stimulus IEP HCCA
MF GO:1904680 peptide transmembrane transporter activity IEP HCCA
InterPro domains Description Start Stop
IPR031493 Zinc_ribbon_15 49 138
No external refs found!