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  5. Sam_g29979

Sam_g29979


Description : subfamily ABCG transporter & original description: none


Gene families : OG0000071 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000071_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sam_g29979

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00039p00225530 PIS1, ABCG37,... Solute transport.primary active transport.ABC... 0.02 OrthoFinder output from all 47 species
AMTR_s00122p00120860 ABCG40, PDR12,... Solute transport.primary active transport.ABC... 0.03 OrthoFinder output from all 47 species
AT1G15520 ABCG40, PDR12,... pleiotropic drug resistance 12 0.02 OrthoFinder output from all 47 species
AT1G59870 PEN3, ABCG36,... ABC-2 and Plant PDR ABC-type transporter family protein 0.02 OrthoFinder output from all 47 species
Adi_g014210 PEN3, ABCG36,... subfamily ABCG transporter & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g055702 PEN3, ABCG36,... subfamily ABCG transporter & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g33536 PEN3, ABCG36,... subfamily ABCG transporter & original description: none 0.03 OrthoFinder output from all 47 species
Als_g22771 PDR6, ATPDR6 subfamily ABCG transporter & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g65335 PDR6, ATPDR6 subfamily ABCG transporter & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g70240 PEN3, ABCG36,... subfamily ABCG transporter & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene01664.t1 ABCG40, PDR12,... subfamily ABCG transporter & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene02114.t1 PEN3, ABCG36,... subfamily ABCG transporter & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene02131.t1 PEN3, ABCG36,... subfamily ABCG transporter & original description: none 0.07 OrthoFinder output from all 47 species
Aspi01Gene20025.t1 PDR1, ATPDR1,... subfamily ABCG transporter & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene28060.t1 ABCG40, PDR12,... subfamily ABCG transporter & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene53447.t1 PEN3, ABCG36,... subfamily ABCG transporter & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene64035.t1 PDR6, ATPDR6,... subfamily ABCG transporter & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene64035.t2 PDR6, ATPDR6,... subfamily ABCG transporter & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene69040.t1 PDR11, ATPDR11,... subfamily ABCG transporter & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene69802.t1 ATPDR3, PDR3,... subfamily ABCG transporter & original description: none 0.02 OrthoFinder output from all 47 species
Azfi_s0388.g067636 ATPDR3, PDR3 subfamily ABCG transporter & original description: CDS=125-3580 0.02 OrthoFinder output from all 47 species
Cba_g10025 ABCG40, PDR12,... subfamily ABCG transporter & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.10G030800.1 PEN3, ABCG36,... subfamily ABCG transporter & original description:... 0.04 OrthoFinder output from all 47 species
Cre12.g540650 ATPDR3, PDR3 Solute transport.primary active transport.ABC... 0.01 OrthoFinder output from all 47 species
Dcu_g22614 ATPDR3, PDR3 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dde_g05962 PDR6, ATPDR6 subfamily ABCG transporter & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g10607 PEN3, ABCG36,... not classified & original description: none 0.04 OrthoFinder output from all 47 species
GSVIVT01017204001 ABCG40, PDR12,... Solute transport.primary active transport.ABC... 0.02 OrthoFinder output from all 47 species
LOC_Os12g32820.1 ATPDR5, PDR5,... subfamily ABCG transporter 0.03 OrthoFinder output from all 47 species
MA_42871g0010 PEN3, ABCG36,... subfamily ABCG transporter 0.03 OrthoFinder output from all 47 species
Msp_g25775 PDR11, ATPDR11 subfamily ABCG transporter & original description: none 0.02 OrthoFinder output from all 47 species
Msp_g38848 PDR6, ATPDR6 subfamily ABCG transporter & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g01506 PEN3, ABCG36,... subfamily ABCG transporter & original description: none 0.02 OrthoFinder output from all 47 species
Nbi_g03872 PEN3, ABCG36,... subfamily ABCG transporter & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g04816 ABCG40, PDR12,... subfamily ABCG transporter & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g33567 PDR11, ATPDR11 subfamily ABCG transporter & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g08076 PEN3, ABCG36,... subfamily ABCG transporter & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g18638 PEN3, ABCG36,... subfamily ABCG transporter & original description: none 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0044.g013064 ABCG40, PDR12,... subfamily ABCG transporter & original description: CDS=213-3857 0.03 OrthoFinder output from all 47 species
Smo82705 ATPDR3, PDR3 Solute transport.primary active transport.ABC... 0.03 OrthoFinder output from all 47 species
Smo99541 ABCG40, PDR12,... Solute transport.primary active transport.ABC... 0.03 OrthoFinder output from all 47 species
Solyc05g053590.4.1 ABCG40, PDR12,... subfamily ABCG transporter 0.02 OrthoFinder output from all 47 species
Solyc09g091660.3.1 ABCG40, PDR12,... subfamily ABCG transporter 0.02 OrthoFinder output from all 47 species
Tin_g09989 PEN3, ABCG36,... subfamily ABCG transporter & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g27149 PEN3, ABCG36,... subfamily ABCG transporter & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0140359 ABC-type transporter activity IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP HCCA
MF GO:0004672 protein kinase activity IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005524 ATP binding IEP HCCA
BP GO:0006468 protein phosphorylation IEP HCCA
BP GO:0006793 phosphorus metabolic process IEP HCCA
BP GO:0006796 phosphate-containing compound metabolic process IEP HCCA
MF GO:0008270 zinc ion binding IEP HCCA
MF GO:0016301 kinase activity IEP HCCA
BP GO:0016310 phosphorylation IEP HCCA
MF GO:0016740 transferase activity IEP HCCA
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP HCCA
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
BP GO:0019538 protein metabolic process IEP HCCA
MF GO:0030554 adenyl nucleotide binding IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
MF GO:0032559 adenyl ribonucleotide binding IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
BP GO:0036211 protein modification process IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0043168 anion binding IEP HCCA
BP GO:0043412 macromolecule modification IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
MF GO:0140096 catalytic activity, acting on a protein IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
InterPro domains Description Start Stop
IPR013581 PDR_assoc 810 873
IPR029481 ABC_trans_N 180 231
IPR013525 ABC_2_trans 593 805
IPR013525 ABC_2_trans 1294 1507
IPR003439 ABC_transporter-like_ATP-bd 997 1149
IPR003439 ABC_transporter-like_ATP-bd 256 438
IPR043926 ABCG_dom 1178 1239
IPR043926 ABCG_dom 471 527
No external refs found!