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  5. Sam_g29948

Sam_g29948


Description : not classified & original description: none


Gene families : OG0000977 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000977_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sam_g29948

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00007p00263470 evm_27.TU.AmTr_v1... COP1-interacting protein 7 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
AT1G72410 No alias COP1-interacting protein-related 0.02 OrthoFinder output from all 47 species
Aspi01Gene39976.t2 Aspi01Gene39976 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene60467.t2 Aspi01Gene60467 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g06229 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Gb_39029 No alias COP1-interacting protein 7 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
LOC_Os07g42410.1 LOC_Os07g42410 COP1-interacting protein 7 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003774 cytoskeletal motor activity IEP HCCA
MF GO:0004842 ubiquitin-protein transferase activity IEP HCCA
BP GO:0006743 ubiquinone metabolic process IEP HCCA
BP GO:0006744 ubiquinone biosynthetic process IEP HCCA
CC GO:0016459 myosin complex IEP HCCA
BP GO:0016567 protein ubiquitination IEP HCCA
MF GO:0019787 ubiquitin-like protein transferase activity IEP HCCA
MF GO:0030554 adenyl nucleotide binding IEP HCCA
BP GO:0032446 protein modification by small protein conjugation IEP HCCA
MF GO:0032559 adenyl ribonucleotide binding IEP HCCA
BP GO:0036211 protein modification process IEP HCCA
BP GO:0042180 cellular ketone metabolic process IEP HCCA
BP GO:0042181 ketone biosynthetic process IEP HCCA
BP GO:0043412 macromolecule modification IEP HCCA
MF GO:0043531 ADP binding IEP HCCA
BP GO:0044283 small molecule biosynthetic process IEP HCCA
BP GO:0070647 protein modification by small protein conjugation or removal IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:0140096 catalytic activity, acting on a protein IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
BP GO:1901661 quinone metabolic process IEP HCCA
BP GO:1901663 quinone biosynthetic process IEP HCCA

No InterPro domains available for this sequence

No external refs found!