Sam_g29924


Description : villin actin-crosslinking factor & original description: none


Gene families : OG0000479 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000479_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sam_g29924

Target Alias Description ECC score Gene Family Method Actions
AT5G57320 VLN5 villin, putative 0.02 OrthoFinder output from all 47 species
Ehy_g12798 VLN1, ATVLN1 villin actin-crosslinking factor & original description: none 0.02 OrthoFinder output from all 47 species
Nbi_g21802 ATVLN2, VLN2 villin actin-crosslinking factor & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g08753 ATVLN2, VLN2 villin actin-crosslinking factor & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g18012 ATVLN2, VLN2 villin actin-crosslinking factor & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g45406 ATVLN3, VLN3 villin actin-crosslinking factor & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g14398 No alias villin actin-crosslinking factor & original description: none 0.07 OrthoFinder output from all 47 species
Sam_g17205 No alias villin actin-crosslinking factor & original description: none 0.04 OrthoFinder output from all 47 species
Sam_g25910 No alias villin actin-crosslinking factor & original description: none 0.1 OrthoFinder output from all 47 species
Sam_g46085 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g47072 No alias villin actin-crosslinking factor & original description: none 0.08 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003735 structural constituent of ribosome IEP HCCA
MF GO:0003779 actin binding IEP HCCA
MF GO:0004478 methionine adenosyltransferase activity IEP HCCA
MF GO:0005198 structural molecule activity IEP HCCA
CC GO:0005575 cellular_component IEP HCCA
CC GO:0005840 ribosome IEP HCCA
BP GO:0006412 translation IEP HCCA
BP GO:0006518 peptide metabolic process IEP HCCA
BP GO:0006556 S-adenosylmethionine biosynthetic process IEP HCCA
BP GO:0006790 sulfur compound metabolic process IEP HCCA
BP GO:0006807 nitrogen compound metabolic process IEP HCCA
BP GO:0008150 biological_process IEP HCCA
BP GO:0008152 metabolic process IEP HCCA
MF GO:0009055 electron transfer activity IEP HCCA
BP GO:0009058 biosynthetic process IEP HCCA
BP GO:0009059 macromolecule biosynthetic process IEP HCCA
BP GO:0009987 cellular process IEP HCCA
MF GO:0016765 transferase activity, transferring alkyl or aryl (other than methyl) groups IEP HCCA
BP GO:0019538 protein metabolic process IEP HCCA
BP GO:0034641 cellular nitrogen compound metabolic process IEP HCCA
BP GO:0034645 cellular macromolecule biosynthetic process IEP HCCA
BP GO:0043043 peptide biosynthetic process IEP HCCA
BP GO:0043170 macromolecule metabolic process IEP HCCA
CC GO:0043226 organelle IEP HCCA
CC GO:0043228 non-membrane-bounded organelle IEP HCCA
CC GO:0043229 intracellular organelle IEP HCCA
CC GO:0043232 intracellular non-membrane-bounded organelle IEP HCCA
BP GO:0043603 amide metabolic process IEP HCCA
BP GO:0043604 amide biosynthetic process IEP HCCA
BP GO:0044237 cellular metabolic process IEP HCCA
BP GO:0044238 primary metabolic process IEP HCCA
BP GO:0044249 cellular biosynthetic process IEP HCCA
BP GO:0044260 cellular macromolecule metabolic process IEP HCCA
BP GO:0044271 cellular nitrogen compound biosynthetic process IEP HCCA
BP GO:0044272 sulfur compound biosynthetic process IEP HCCA
BP GO:0046500 S-adenosylmethionine metabolic process IEP HCCA
BP GO:0071704 organic substance metabolic process IEP HCCA
CC GO:0110165 cellular anatomical entity IEP HCCA
BP GO:1901564 organonitrogen compound metabolic process IEP HCCA
BP GO:1901566 organonitrogen compound biosynthetic process IEP HCCA
BP GO:1901576 organic substance biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR007123 Gelsolin-like_dom 179 240
IPR007123 Gelsolin-like_dom 64 139
IPR007123 Gelsolin-like_dom 295 368
No external refs found!